Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.14□□□□□ -1.27
COL1A1P02452 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.14□□□□□ -1.27
COL1A1P02452 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.14□□□□□ -1.27
COL1A1P02452 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.14□□□□□ -1.27
COL1A1P02452 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL1A1P02452 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
COL1A1P02452 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.14□□□□□ -1.27
COL1A1P02452 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL1A1P02452 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 AL596448.1-201ENST00000415024 392 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.14□□□□□ -1.27
COL1A1P02452 AC004129.2-201ENST00000457229 287 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 EIF3LP3-201ENST00000495197 822 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 IGLV2-28-201ENST00000520681 304 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 TPM3P3-201ENST00000521343 354 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.14□□□□□ -1.27
COL1A1P02452 OR7A1P-201ENST00000601206 970 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 FAM27E4-201ENST00000605259 342 ntBASIC7.14□□□□□ -1.27
COL1A1P02452 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.14□□□□□ -1.27
COL1A1P02452 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL1A1P02452 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL1A1P02452 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
COL1A1P02452 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 FO393409.1-201ENST00000399325 1372 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.13□□□□□ -1.27
COL1A1P02452 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL1A1P02452 AL357752.1-201ENST00000412817 349 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.13□□□□□ -1.27
COL1A1P02452 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.13□□□□□ -1.27
COL1A1P02452 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 AL162739.1-201ENST00000450606 307 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 RPS17P15-201ENST00000475609 349 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 AC108693.1-201ENST00000496068 432 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 AC074087.1-201ENST00000512059 724 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.13□□□□□ -1.27
COL1A1P02452 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.13□□□□□ -1.27
COL1A1P02452 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 FO393422.1-201ENST00000603908 708 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 CU639417.4-201ENST00000623928 207 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 AC004808.2-201ENST00000627965 773 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 AL596275.2-208ENST00000641192 594 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.13□□□□□ -1.27
COL1A1P02452 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.13□□□□□ -1.27
COL1A1P02452 AC241584.2-201ENST00000637142 2090 ntBASIC7.13□□□□□ -1.27
COL1A1P02452 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL1A1P02452 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 AC007842.1-201ENST00000597336 2039 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL1A1P02452 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.12□□□□□ -1.27
COL1A1P02452 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.12□□□□□ -1.27
COL1A1P02452 AC011225.1-201ENST00000457751 369 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 PFN1P6-201ENST00000476786 399 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 AC006499.3-201ENST00000506077 748 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.12□□□□□ -1.27
COL1A1P02452 IGBP1P1-201ENST00000554337 1009 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 AL445670.1-201ENST00000618889 801 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 MIR6730-201ENST00000622213 67 ntBASIC7.12□□□□□ -1.27
COL1A1P02452 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL1A1P02452 FBXL21-201ENST00000297158 1305 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms