Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 HSPA8P17-201ENST00000427029 1382 ntBASIC8.73□□□□□ -1.01
RNF40O75150 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.73□□□□□ -1.01
RNF40O75150 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
RNF40O75150 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RNF40O75150 AC025040.2-201ENST00000558657 1852 ntBASIC8.72□□□□□ -1.01
RNF40O75150 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 OR8B9P-202ENST00000642028 5216 ntBASIC8.72□□□□□ -1.01
RNF40O75150 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RNF40O75150 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RNF40O75150 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RNF40O75150 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 Y_RNA.311-201ENST00000365068 96 ntBASIC8.72□□□□□ -1.01
RNF40O75150 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 GZMB-203ENST00000382542 666 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RNF40O75150 Y_RNA.431-201ENST00000384086 102 ntBASIC8.72□□□□□ -1.01
RNF40O75150 SNORA40.3-201ENST00000390964 122 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC007066.1-201ENST00000392902 381 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 TRIM43CP-201ENST00000422468 1028 ntBASIC8.72□□□□□ -1.01
RNF40O75150 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 AC018644.1-201ENST00000429934 551 ntBASIC8.72□□□□□ -1.01
RNF40O75150 HMGN2P24-201ENST00000433516 273 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC242426.1-201ENST00000435270 960 ntBASIC8.72□□□□□ -1.01
RNF40O75150 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 BX679664.2-201ENST00000439282 283 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AL359711.1-201ENST00000441999 123 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 AL451074.1-202ENST00000453762 989 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 RN7SL706P-201ENST00000460079 292 ntBASIC8.72□□□□□ -1.01
RNF40O75150 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 AC023794.3-204ENST00000510754 236 ntBASIC8.72□□□□□ -1.01
RNF40O75150 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 Y_RNA.704-201ENST00000516851 102 ntBASIC8.72□□□□□ -1.01
RNF40O75150 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.72□□□□□ -1.01
RNF40O75150 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 PDCD5P1-201ENST00000543528 309 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC007424.1-203ENST00000554613 687 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC044913.1-201ENST00000557200 430 ntBASIC8.72□□□□□ -1.01
RNF40O75150 SOD1P2-201ENST00000563903 451 ntBASIC8.72□□□□□ -1.01
RNF40O75150 TUBAP4-201ENST00000569261 416 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.72□□□□□ -1.01
RNF40O75150 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 OR7A8P-201ENST00000595427 913 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 AL133255.1-201ENST00000606374 441 ntBASIC8.72□□□□□ -1.01
RNF40O75150 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC8.72□□□□□ -1.01
RNF40O75150 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RNF40O75150 AC124319.3-201ENST00000616832 526 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AP000356.4-201ENST00000639500 172 ntBASIC8.72□□□□□ -1.01
RNF40O75150 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 NCOA4P2-201ENST00000340589 1813 ntBASIC8.72□□□□□ -1.01
RNF40O75150 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RNF40O75150 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC8.72□□□□□ -1.01
RNF40O75150 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.72□□□□□ -1.01
RNF40O75150 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.72□□□□□ -1.01
RNF40O75150 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.72□□□□□ -1.01
RNF40O75150 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RNF40O75150 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.71□□□□□ -1.01
RNF40O75150 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RNF40O75150 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
RNF40O75150 Z99129.4-201ENST00000624649 2435 ntBASIC8.71□□□□□ -1.01
RNF40O75150 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.71□□□□□ -1.01
RNF40O75150 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RNF40O75150 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms