Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTCO3P39-201ENST00000514812 518 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 RN7SKP288-201ENST00000516227 268 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SLC28A1O00337 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AP005901.4-201ENST00000577336 569 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.82□□□□□ -1.48
SLC28A1O00337 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AC089999.3-201ENST00000622440 577 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 MSL3P1-202ENST00000440028 1468 ntBASIC5.82□□□□□ -1.48
SLC28A1O00337 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC28A1O00337 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC28A1O00337 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC28A1O00337 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SLC28A1O00337 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC005224.3-201ENST00000584683 2140 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 Z95114.1-201ENST00000624264 14574 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SLC28A1O00337 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 OR10R3P-201ENST00000361688 942 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SLC28A1O00337 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SLC28A1O00337 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 AL096829.1-201ENST00000413677 457 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 VN1R3-201ENST00000418822 919 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 RPL12P12-201ENST00000424633 501 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AL022324.2-201ENST00000434827 780 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC28A1O00337 KRT8P51-201ENST00000438938 274 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AC245291.3-201ENST00000443400 292 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 RPS18P1-201ENST00000447840 458 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC28A1O00337 OSTCP1-201ENST00000455507 450 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC28A1O00337 MRPL57P6-201ENST00000506570 309 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.81□□□□□ -1.48
SLC28A1O00337 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC021269.1-201ENST00000526860 705 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC005632.2-201ENST00000564271 828 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC011891.2-201ENST00000604949 397 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 AC093388.1-201ENST00000609166 430 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 MIR6885-201ENST00000612241 66 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 AC009120.7-201ENST00000623452 780 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 LINC01613-201ENST00000561476 2780 ntBASIC5.81□□□□□ -1.48
SLC28A1O00337 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SLC28A1O00337 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC28A1O00337 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SLC28A1O00337 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC022325.1-201ENST00000502748 2199 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SLC28A1O00337 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SLC28A1O00337 SNORA64.3-201ENST00000365647 134 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SLC28A1O00337 PSMA6P1-201ENST00000400275 741 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms