Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 RN7SL326P-201ENST00000477493 296 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 TRIM51DP-201ENST00000529746 596 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AP004609.2-201ENST00000532177 190 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC008507.3-201ENST00000585753 472 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC073333.2-201ENST00000603589 769 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC092266.1-201ENST00000610958 165 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC024255.1-201ENST00000614376 102 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 MIR7159-201ENST00000620587 66 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AL117378.2-201ENST00000622916 1337 ntBASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPIPA2E9PIF3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 LCN1P2-201ENST00000372030 223 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 SNORA51.9-201ENST00000384295 124 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 NPM1P48-201ENST00000436002 853 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 ATP5LP2-201ENST00000440646 311 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC097463.1-201ENST00000447288 481 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 PPIAP7-201ENST00000454070 489 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC023194.2-201ENST00000465398 406 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 RPL34P33-201ENST00000486062 334 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 LDHAP1-201ENST00000509421 992 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 RNA5SP400-201ENST00000517155 111 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AP000620.1-201ENST00000527147 504 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC092332.1-201ENST00000563684 829 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms