Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 CASP1P2-201ENST00000526830 1258 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 FCGR1CP-201ENST00000579737 1127 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 DIMT1P1-201ENST00000603970 763 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 NDUFB9P1-201ENST00000604683 510 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 SNORD96A-201ENST00000606577 79 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC012510.1-201ENST00000607946 759 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AL162574.1-201ENST00000615702 950 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC009283.1-201ENST00000615852 645 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 ABCC13-202ENST00000463099 3842 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 HSPA8P14-201ENST00000552265 1805 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RBFOX3A6NFN3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
RBFOX3A6NFN3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RBFOX3A6NFN3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 TET1P1-201ENST00000426627 2301 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 U3.7-201ENST00000363668 216 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 MIR27A-201ENST00000385073 78 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PDCL3P5-201ENST00000398028 722 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 NPM1P31-201ENST00000399021 764 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 RN7SKP268-201ENST00000411107 316 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AL662791.3-201ENST00000413771 776 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC108479.1-201ENST00000431142 427 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 RPS7P4-201ENST00000444127 582 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 EIF3LP2-201ENST00000457262 807 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 TREML3P-201ENST00000457327 501 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC114940.1-201ENST00000512162 1265 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PDCL3P1-201ENST00000534575 734 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC090424.1-201ENST00000535243 736 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC126323.4-201ENST00000566935 234 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 CCDC58P1-201ENST00000578567 430 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 ACTG1P22-201ENST00000603793 1099 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 RN7SL261P-201ENST00000613441 282 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 AC007938.2-201ENST00000604666 2634 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 RBPJP6-201ENST00000411556 1431 ntBASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.71□□□□□ -1.66
RBFOX3A6NFN3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RBFOX3A6NFN3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms