Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP000240.1-201ENST00000609910 452 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL359742.1-201ENST00000622497 540 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 SALL4P7-201ENST00000555779 3120 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AC079298.1-201ENST00000625026 1619 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 AL391261.1-201ENST00000555712 1479 ntBASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.3□□□□□ -1.24
COL4A3BPQ9Y5P4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 CASC19-281ENST00000642118 1554 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 MTCO1P4-201ENST00000520516 1409 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC099535.1-201ENST00000408928 371 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SKP221-201ENST00000410420 301 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC093716.1-201ENST00000435923 377 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 MTCYBP12-201ENST00000440559 1134 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 RNF2P1-201ENST00000442955 1010 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL161722.1-201ENST00000446972 1032 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SYT14P1-201ENST00000481459 721 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SL741P-201ENST00000482473 289 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 NPM1P28-201ENST00000492269 840 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SL568P-201ENST00000493069 298 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 GUSBP9-201ENST00000510138 584 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SCARNA5-201ENST00000516201 276 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC025918.2-201ENST00000558683 763 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 MT1CP-201ENST00000567054 174 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC067852.5-201ENST00000589299 310 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 WBP1LP12-201ENST00000604449 331 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AP001033.2-201ENST00000609701 1003 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL589743.6-201ENST00000611025 117 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AC016957.2-201ENST00000616998 848 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL138955.1-201ENST00000622881 1040 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 FRG1DP-201ENST00000635586 771 ntBASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 MTND4P9-201ENST00000507819 1346 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AL035405.1-201ENST00000400795 710 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms