Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC010401.2-201ENST00000575137 4934 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RAD1P1-201ENST00000231383 813 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RNA5SP140-201ENST00000364524 92 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RNA5SP512-201ENST00000364550 120 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RN7SKP240-201ENST00000410583 375 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 MTND4LP13-201ENST00000425022 298 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC115283.1-201ENST00000427353 400 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AL022319.1-201ENST00000458183 1167 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AP002884.1-201ENST00000479691 655 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC023818.1-201ENST00000498379 384 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC113367.2-201ENST00000505749 160 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 MTCO3P27-201ENST00000514397 196 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AP001372.4-201ENST00000524889 472 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 DPPA3P2-201ENST00000553589 478 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AL162632.2-201ENST00000553933 399 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC084759.1-201ENST00000561168 290 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC015982.1-201ENST00000608113 465 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 MIR6721-201ENST00000617181 87 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AL133370.2-201ENST00000619934 439 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC068787.1-201ENST00000623908 691 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 AC062022.1-201ENST00000451026 1684 ntBASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB1Q9Y5F3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC078880.4-201ENST00000617627 1749 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL024507.1-201ENST00000412741 274 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL929472.1-201ENST00000417484 429 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 ARL2BPP3-201ENST00000421226 480 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC092106.2-201ENST00000436597 487 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 TVP23CP1-201ENST00000450317 639 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC018638.3-201ENST00000461273 132 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 RN7SL413P-201ENST00000482700 297 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 OR52K3P-201ENST00000531655 943 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC084121.1-201ENST00000533882 835 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 NOP56P3-201ENST00000549457 385 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 MTND1P24-201ENST00000552175 861 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 MRPS21P9-201ENST00000571150 257 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 AC006116.5-201ENST00000591936 559 ntBASIC6.56□□□□□ -1.36
PCDHB1Q9Y5F3 BUB1P1-201ENST00000603541 607 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms