Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AL022578.1-201ENST00000439330 1433 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 RN7SKP261-201ENST00000410948 278 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 TAF13P2-201ENST00000416876 286 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 LINC00993-201ENST00000420453 540 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC134879.1-201ENST00000426062 394 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AL591363.1-201ENST00000450091 483 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 RPS27AP2-201ENST00000457576 465 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 PMCHL2-203ENST00000457791 237 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 RN7SL392P-201ENST00000473024 299 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 RPS4XP17-201ENST00000479057 754 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC007151.1-201ENST00000572774 483 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 MIR3668-201ENST00000582138 75 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC012065.4-201ENST00000602445 679 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 IGKV2OR2-7-201ENST00000604652 304 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AL096855.2-201ENST00000605785 369 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AC122710.3-201ENST00000606566 541 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 AL050343.2-201ENST00000607338 280 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 MFSD8-245ENST00000641743 948 ntBASIC10.36□□□□□ -0.75
PHF8Q9UPP1 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
PHF8Q9UPP1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 RN7SKP118-201ENST00000364331 330 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 MIR551B-201ENST00000384984 96 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 HCG25-217ENST00000422366 702 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 OR5AW1P-201ENST00000426334 1006 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 DKK2-202ENST00000510463 908 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AP003084.1-201ENST00000524828 742 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 OR7E161P-201ENST00000533722 967 ntBASIC10.35□□□□□ -0.75
PHF8Q9UPP1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
PHF8Q9UPP1 CHEK2P2-201ENST00000554701 672 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms