Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 AL133173.1-201ENST00000423458 397 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 TNPO1P1-201ENST00000423641 1138 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 AC023141.8-201ENST00000442554 208 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 NRBF2P4-201ENST00000520874 850 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 MIR4311-201ENST00000580794 100 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 MIR8080-201ENST00000622224 89 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 AC007683.2-201ENST00000624681 714 ntBASIC7.53□□□□□ -1.2
SCN11AQ9UI33 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.53□□□□□ -1.2
SCN11AQ9UI33 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
SCN11AQ9UI33 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
SCN11AQ9UI33 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC089998.1-201ENST00000548575 3141 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 RN7SKP160-201ENST00000363804 340 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AP003170.5-201ENST00000397185 335 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC096775.1-201ENST00000437724 448 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC019185.1-201ENST00000442718 389 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 RPL32P9-201ENST00000487963 407 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 RN7SL547P-201ENST00000490793 290 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AC211433.2-201ENST00000608433 387 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 AL390318.1-201ENST00000624564 687 ntBASIC7.52□□□□□ -1.21
SCN11AQ9UI33 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN11AQ9UI33 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 PRUNEP1-201ENST00000425846 705 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 AL450023.1-201ENST00000450868 751 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 VDAC2P4-201ENST00000452925 711 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 DUTP7-201ENST00000507982 486 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 MIR6730-201ENST00000622213 67 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 AC087516.1-201ENST00000561236 2428 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 RNA5SP443-201ENST00000363083 132 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 SNORA74A-201ENST00000364089 198 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 AL035661.1-201ENST00000620459 1144 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.51□□□□□ -1.21
SCN11AQ9UI33 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN11AQ9UI33 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 Y_RNA.625-201ENST00000411256 107 ntBASIC7.5□□□□□ -1.21
SCN11AQ9UI33 NANOGP4-201ENST00000427230 913 ntBASIC7.5□□□□□ -1.21
SCN11AQ9UI33 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.5□□□□□ -1.21
SCN11AQ9UI33 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms