Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 PCNAP4-201ENST00000532690 730 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 KARSP1-201ENST00000451871 1752 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.02□□□□□ -1.13
NPC1L1Q9UHC9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 TMSB4XP2-201ENST00000335179 210 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 RN7SKP69-201ENST00000365390 305 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 SNRPEP6-201ENST00000407465 277 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC004129.2-201ENST00000457229 287 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC011476.1-201ENST00000466725 307 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 RN7SKP288-201ENST00000516227 268 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC008521.2-201ENST00000591021 259 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AC009779.8-201ENST00000641684 4384 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 AP003175.1-201ENST00000641383 6658 ntBASIC8.01□□□□□ -1.13
NPC1L1Q9UHC9 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 FBXL21-201ENST00000297158 1305 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 RN7SKP279-201ENST00000411383 298 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC016769.2-201ENST00000414815 475 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 USP24P1-201ENST00000433802 779 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 PFN1P6-201ENST00000476786 399 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC106872.4-201ENST00000510050 523 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 RNA5SP271-201ENST00000516700 88 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC090424.1-201ENST00000535243 736 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AL163952.1-202ENST00000569625 600 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC069234.4-201ENST00000621276 412 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 5S_rRNA.28-201ENST00000638107 119 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 PDZK1P1-202ENST00000425209 1350 ntBASIC8□□□□□ -1.13
NPC1L1Q9UHC9 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8□□□□□ -1.13
NPC1L1Q9UHC9 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 RN7SKP229-201ENST00000410465 302 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 MTND4LP17-201ENST00000414607 293 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 RPS3P2-201ENST00000421346 701 ntBASIC7.99□□□□□ -1.13
NPC1L1Q9UHC9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms