Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 OR2W4P-201ENST00000406496 926 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC104339.1-201ENST00000465478 348 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC006539.1-201ENST00000481419 501 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 RPL9P15-201ENST00000491096 532 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AL445670.1-201ENST00000618889 801 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 OR11H2-202ENST00000641517 1085 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 HSPD1P9-201ENST00000420325 1636 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 FBXL21-201ENST00000297158 1305 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC110716.2-201ENST00000563865 3945 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 FUNDC2P3-201ENST00000334716 533 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 RNFT1P3-201ENST00000340898 1052 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 RNA5SP232-201ENST00000364144 119 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 MIR1275-201ENST00000408770 80 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 YRDCP3-201ENST00000456507 480 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC021006.1-201ENST00000489849 553 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AL117692.1-201ENST00000494283 713 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 OR4A42P-201ENST00000531397 938 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AL121594.2-201ENST00000541658 472 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC091078.2-201ENST00000557145 559 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 MIR4502-201ENST00000580432 81 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC092266.1-201ENST00000610958 165 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC022400.9-201ENST00000623633 273 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 AC138907.8-201ENST00000623981 2256 ntBASIC6.34□□□□□ -1.39
SIX2Q9NPC8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SIX2Q9NPC8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SIX2Q9NPC8 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SIX2Q9NPC8 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC140479.2-201ENST00000421567 3130 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 GAPDHP48-201ENST00000436626 961 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 RBMY2AP-201ENST00000445405 1157 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 TIMM8BP2-201ENST00000445940 251 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 RBMY2CP-201ENST00000448575 1157 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 RBMY2DP-202ENST00000448881 1157 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC005077.1-201ENST00000449226 375 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 RNA5SP340-201ENST00000517132 107 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms