Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 AL078595.2-201ENST00000605309 1780 ntBASIC6.39□□□□□ -1.39
TRIM54Q9BYV2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 Z86062.1-201ENST00000406773 777 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AL356968.2-201ENST00000412769 1257 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC007568.1-201ENST00000422912 471 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 SPATA20P1-201ENST00000423089 438 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MTCO1P51-201ENST00000427672 1060 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC011242.1-201ENST00000433596 1158 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MTATP6P14-201ENST00000455189 673 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC022206.1-201ENST00000495947 347 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC034244.2-201ENST00000514668 858 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 SCARNA5-201ENST00000516201 276 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 RN7SKP248-201ENST00000516278 305 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC084337.1-201ENST00000524809 686 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC090115.2-201ENST00000548060 883 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC093014.1-201ENST00000548926 724 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC005726.4-201ENST00000582858 458 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AL137246.2-201ENST00000613439 662 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC004477.3-201ENST00000614061 590 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MIR6085-201ENST00000618314 110 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC095038.2-201ENST00000621464 1070 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MRPL57P1-201ENST00000621486 265 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC119674.1-213ENST00000641177 1386 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 MTCO1P4-201ENST00000520516 1409 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 TCP1P3-201ENST00000414406 1498 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 BX284613.1-201ENST00000452221 1641 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 AC105235.1-201ENST00000623208 1816 ntBASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM54Q9BYV2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 PPIAP24-201ENST00000328558 471 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 RN7SKP257-201ENST00000364525 309 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 MRPS6P2-201ENST00000381143 370 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 RNU6-1000P-201ENST00000391066 106 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 CDC42P6-201ENST00000421246 576 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 RPL23AP85-201ENST00000421838 433 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AP003385.1-201ENST00000426387 893 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AL645931.1-201ENST00000439737 410 ntBASIC6.37□□□□□ -1.39
TRIM54Q9BYV2 AL627224.1-201ENST00000448334 444 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms