Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
USB1Q9BQ65 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
USB1Q9BQ65 AC010886.1-201ENST00000437380 2869 ntBASIC7.79□□□□□ -1.16
USB1Q9BQ65 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
USB1Q9BQ65 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 AP002364.1-201ENST00000623330 3386 ntBASIC7.79□□□□□ -1.16
USB1Q9BQ65 AC068044.1-201ENST00000441585 1978 ntBASIC7.79□□□□□ -1.16
USB1Q9BQ65 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
USB1Q9BQ65 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC006378.2-201ENST00000623178 2476 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF101P1-201ENST00000435701 1720 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC127070.5-201ENST00000623177 2104 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 GNG5P1-201ENST00000255500 204 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 RNU6-492P-201ENST00000363035 104 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 Y_RNA.159-201ENST00000363674 87 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 CENPW-202ENST00000368326 443 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 Y_RNA.387-201ENST00000383918 102 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 RPS27-202ENST00000392558 625 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 RN7SKP169-201ENST00000411124 291 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 CNOT4P1-201ENST00000417432 1199 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC114814.2-201ENST00000419195 485 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 MTCYBP8-201ENST00000422855 651 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 RPL7P57-201ENST00000423238 740 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AL591212.2-201ENST00000433923 257 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 GTF2IP13-201ENST00000438487 386 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 RPL5P25-201ENST00000441148 775 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 LDHAP3-201ENST00000448312 1008 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MTCO2P29-201ENST00000465212 189 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC083798.1-201ENST00000472671 131 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 PLA2G12AP1-201ENST00000497678 568 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC131392.1-201ENST00000506490 633 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC138866.2-201ENST00000508650 584 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 GUSBP9-201ENST00000510138 584 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC034159.1-201ENST00000513885 583 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 ADI1P2-201ENST00000514945 429 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 RNU6-885P-201ENST00000516607 104 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 EIF4EBP1P1-201ENST00000557776 341 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 RPS7P1-201ENST00000571702 585 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 MIR4266-201ENST00000583300 55 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 RNF157-207ENST00000592271 755 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 CKS1BP3-201ENST00000600888 237 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC113361.1-201ENST00000606683 543 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AL732618.1-201ENST00000623251 301 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC015908.5-201ENST00000623289 343 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC231657.1-201ENST00000624313 397 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.78□□□□□ -1.16
USB1Q9BQ65 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 350 ms