Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC068870.3-201ENST00000625077 2536 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AOX2P-204ENST00000487742 3284 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 SNORA51.2-201ENST00000364595 132 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 VN1R33P-201ENST00000411800 887 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AMD1P2-201ENST00000412936 992 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 RANP6-201ENST00000413691 644 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 RPL7P56-201ENST00000429441 717 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 PGBD4P3-201ENST00000440731 581 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 PRDX2P4-201ENST00000447134 600 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 YAP1P2-201ENST00000455104 610 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 RPLP0P1-201ENST00000457002 361 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC091564.1-201ENST00000464563 479 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC007547.2-201ENST00000468802 360 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 RNY4P37-201ENST00000516225 96 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 IGHV3-63-201ENST00000518422 341 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC107952.1-201ENST00000524200 376 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 HMGN1P26-201ENST00000558737 303 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL157394.1-201ENST00000562983 1224 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC012507.3-201ENST00000603556 477 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC087283.1-201ENST00000604029 1074 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL360085.1-201ENST00000604713 532 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL136295.6-201ENST00000610486 658 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL365204.3-201ENST00000612448 685 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 AL391903.2-201ENST00000614532 247 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 MIR6505-201ENST00000617206 71 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 RPL36AP21-202ENST00000639134 430 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.44□□□□□ -1.06
PHOX2BQ99453 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 AC007920.2-201ENST00000636210 1973 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 PART1-202ENST00000506884 2068 ntTSL 2 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.44□□□□□ -1.06
PHOX2BQ99453 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHOX2BQ99453 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 AC009021.2-201ENST00000567401 1666 ntBASIC8.43□□□□□ -1.06
PHOX2BQ99453 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
PHOX2BQ99453 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
PHOX2BQ99453 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 AC011447.6-201ENST00000623510 2598 ntBASIC8.43□□□□□ -1.06
PHOX2BQ99453 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PHOX2BQ99453 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.43□□□□□ -1.06
PHOX2BQ99453 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.43□□□□□ -1.06
PHOX2BQ99453 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.43□□□□□ -1.06
PHOX2BQ99453 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms