Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL671309.1-201ENST00000603750 544 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 MIR6889-201ENST00000613185 59 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC015819.1-201ENST00000613588 663 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC012653.2-201ENST00000621880 420 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AC097372.4-201ENST00000625025 466 ntBASIC6.33□□□□□ -1.4
VPS50Q96JG6 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS50Q96JG6 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VPS50Q96JG6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AL161912.4-201ENST00000623889 2468 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AP002512.4-202ENST00000641599 4530 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 RNU11-6P-201ENST00000391127 133 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC007568.1-201ENST00000422912 471 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AL139415.1-201ENST00000424862 352 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AL590128.1-201ENST00000433407 286 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC245452.2-201ENST00000435222 392 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 BX679664.2-201ENST00000439282 283 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC099340.1-201ENST00000475247 599 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC138409.2-202ENST00000507274 458 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC037479.1-201ENST00000558361 625 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AL008582.1-201ENST00000609612 442 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 LINC00216-201ENST00000623548 1126 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 AC027559.1-201ENST00000636288 271 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS50Q96JG6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 LINC01616-201ENST00000561816 2280 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS50Q96JG6 AL442128.2-201ENST00000620246 1824 ntBASIC6.32□□□□□ -1.4
VPS50Q96JG6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL513548.1-201ENST00000562904 1724 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 RNA5SP308-201ENST00000362532 115 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 SNORA38B-201ENST00000363524 131 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 SNORA27.3-201ENST00000364937 134 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 RNU1-55P-201ENST00000365510 158 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL133260.1-201ENST00000405720 405 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 MRPS21P2-201ENST00000424704 264 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC239367.3-201ENST00000428996 814 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC083855.1-201ENST00000440041 258 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 PFN1P11-201ENST00000445829 389 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms