Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 RPL11P4-201ENST00000332269 436 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 RPL21P50-201ENST00000417698 477 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 FAM183DP-201ENST00000421987 399 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 LINC00328-2P-201ENST00000436585 219 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 PCNPP2-201ENST00000441651 455 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 SUMO2P1-206ENST00000445436 284 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC234771.2-201ENST00000445718 597 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.99□□□□□ -1.29
HPS3Q969F9 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AC099670.1-201ENST00000455141 783 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC103563.5-201ENST00000455643 364 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AC002075.1-201ENST00000457396 676 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.99□□□□□ -1.29
HPS3Q969F9 RN7SL221P-201ENST00000466190 281 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC022336.1-201ENST00000475510 337 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC044810.1-201ENST00000480271 711 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 RN7SL714P-201ENST00000487050 298 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.99□□□□□ -1.29
HPS3Q969F9 BTG1P1-201ENST00000540396 508 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC009729.1-201ENST00000548873 1133 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 AL133247.2-201ENST00000603236 482 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC024589.2-201ENST00000605642 1294 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC018690.1-201ENST00000608144 626 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AP003499.2-201ENST00000624100 483 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 AC007603.3-201ENST00000636915 979 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 DOCK11P1-201ENST00000553480 5932 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
HPS3Q969F9 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
HPS3Q969F9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 AL136520.1-201ENST00000600311 1322 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
HPS3Q969F9 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.98□□□□□ -1.29
HPS3Q969F9 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 OR10AB1P-202ENST00000641219 1686 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.98□□□□□ -1.29
HPS3Q969F9 OR11H13P-201ENST00000359695 979 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 MIR191-201ENST00000384873 92 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 YWHAZP4-201ENST00000392459 708 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AL445238.1-204ENST00000400311 463 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.98□□□□□ -1.29
HPS3Q969F9 SEPT7P8-201ENST00000413308 775 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.98□□□□□ -1.29
HPS3Q969F9 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
HPS3Q969F9 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.98□□□□□ -1.29
HPS3Q969F9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.98□□□□□ -1.29
HPS3Q969F9 GPN3P1-201ENST00000423883 535 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 OSTCP4-201ENST00000424397 449 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.98□□□□□ -1.29
HPS3Q969F9 VPS25P1-201ENST00000455691 508 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AP002345.1-201ENST00000456493 928 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.98□□□□□ -1.29
HPS3Q969F9 RN7SL369P-201ENST00000477138 299 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.98□□□□□ -1.29
HPS3Q969F9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HPS3Q969F9 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.98□□□□□ -1.29
HPS3Q969F9 RNU6-889P-201ENST00000517189 103 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
HPS3Q969F9 OR4A40P-201ENST00000533878 948 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.98□□□□□ -1.29
HPS3Q969F9 TDGP1-201ENST00000543961 1229 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 CKS1BP1-201ENST00000555221 240 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AC138207.8-204ENST00000579588 527 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.98□□□□□ -1.29
HPS3Q969F9 WBP1LP12-201ENST00000604449 331 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.98□□□□□ -1.29
HPS3Q969F9 AL356608.1-201ENST00000610034 820 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AC022106.1-201ENST00000612834 766 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.98□□□□□ -1.29
HPS3Q969F9 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 1207.3 ms