Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 RAB9AP5-201ENST00000437794 597 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 RAB9AP2-201ENST00000443911 597 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 HIGD1AP16-201ENST00000450986 258 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 ACA64.1-201ENST00000459171 127 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 RN7SL326P-201ENST00000477493 296 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 OR5H7P-201ENST00000514084 930 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC130365.2-201ENST00000525882 1201 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AC006453.5-201ENST00000636451 619 ntBASIC6.36□□□□□ -1.39
HMGB4Q8WW32 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGB4Q8WW32 CASC19-238ENST00000641523 1558 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC083806.2-201ENST00000617795 2685 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL591848.4-201ENST00000567832 3472 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 RNU6-697P-201ENST00000363348 107 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 RN7SKP81-201ENST00000365603 331 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 SNORA11B-201ENST00000408175 129 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 ARAFP1-201ENST00000422172 605 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 CDY8P-201ENST00000428380 1279 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 MTND4LP14-201ENST00000429447 288 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 MTND4LP7-201ENST00000431728 294 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 CDY20P-201ENST00000447528 1279 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 MTND2P39-201ENST00000457230 764 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 RN7SL101P-201ENST00000496350 279 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 MTND6P8-201ENST00000503471 522 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC091965.3-201ENST00000506236 208 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC106872.4-201ENST00000510050 523 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 SCARNA21.2-201ENST00000516600 166 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 IGLV3-6-201ENST00000523937 250 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC007448.1-201ENST00000582714 234 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC011445.2-201ENST00000599274 173 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AP001823.1-201ENST00000604056 1003 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL445649.1-201ENST00000615941 691 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL450226.2-201ENST00000622913 439 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC103703.1-201ENST00000634783 663 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AL133243.2-201ENST00000610331 1621 ntBASIC6.35□□□□□ -1.39
HMGB4Q8WW32 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGB4Q8WW32 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGB4Q8WW32 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms