Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 BIN2P1-201ENST00000504996 1530 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 RPL26P29-201ENST00000415623 438 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 SRSF1P1-201ENST00000424058 520 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 MRPS21P7-201ENST00000566937 238 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AL034549.2-201ENST00000618285 3373 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC011815.2-201ENST00000618230 2021 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 RNU4-64P-201ENST00000410795 131 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 RMRPP5-201ENST00000411156 267 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AL662874.1-201ENST00000426065 230 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC072052.1-201ENST00000496556 306 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 RNA5SP400-201ENST00000517155 111 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC087360.1-201ENST00000518788 616 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC092375.1-201ENST00000550410 637 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 CYP4F35P-202ENST00000636121 390 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AP003119.3-201ENST00000566747 4192 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AL117378.2-201ENST00000622916 1337 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 RPL7P56-201ENST00000429441 717 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 RN7SKP66-201ENST00000516681 231 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC007842.1-201ENST00000597336 2039 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC009120.2-204ENST00000621548 2032 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC092692.1-201ENST00000623625 2595 ntBASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.97□□□□□ -1.77
ALMS1Q8TCU4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AL133173.1-201ENST00000423458 397 ntBASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 RPS27AP3-201ENST00000453803 454 ntBASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC090114.3-201ENST00000479267 829 ntBASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ALMS1Q8TCU4 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC105235.1-201ENST00000623208 1816 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 RPS11P7-201ENST00000442125 465 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC034229.2-201ENST00000566945 2508 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms