Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 RN7SL797P-201ENST00000486314 297 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC010306.1-201ENST00000523223 1117 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC024405.1-201ENST00000532521 1042 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC008015.1-201ENST00000555505 465 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AP003392.5-201ENST00000607857 415 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC108673.3-201ENST00000609183 335 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AP000255.1-201ENST00000610276 676 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 OR8G7P-201ENST00000616658 848 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC099667.1-201ENST00000624222 469 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC103706.2-201ENST00000638080 240 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 MKI67P1-201ENST00000604297 1460 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC003973.3-201ENST00000624863 2822 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC104581.5-201ENST00000624171 7141 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RN7SKP107-201ENST00000364157 290 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RN7SKP189-201ENST00000365042 330 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LARP1P1-201ENST00000407692 292 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AL365203.2-201ENST00000423444 196 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AHCYP8-201ENST00000425108 209 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC005345.1-201ENST00000431868 217 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC090018.1-201ENST00000434369 367 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RPSAP40-201ENST00000442343 891 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AL031681.1-201ENST00000443304 400 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 MTCO2P7-201ENST00000446518 666 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RN7SL83P-201ENST00000468131 297 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC098818.1-201ENST00000478593 252 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RN7SL143P-201ENST00000496780 297 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 OR2A20P-203ENST00000498397 1268 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC138517.1-201ENST00000515724 568 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 MTND1P5-201ENST00000517906 940 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 C1GALT1P3-201ENST00000522049 819 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 CBX3P7-201ENST00000532876 502 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC010198.2-201ENST00000550612 259 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC016839.1-201ENST00000578162 867 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AP005136.1-201ENST00000579765 429 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AP002884.5-201ENST00000595053 1132 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC099676.1-201ENST00000608886 657 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AL049541.2-201ENST00000626377 555 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms