Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 AL109924.4-201ENST00000623089 670 ntBASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 AC087516.1-201ENST00000561236 2428 ntBASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NHLRC1Q6VVB1 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 CASC19-246ENST00000641625 1606 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 HDAC1P2-201ENST00000453661 1398 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC096921.2-201ENST00000561507 1916 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 OR56A4-201ENST00000330728 1209 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 RNU6-819P-201ENST00000364116 107 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 Z82198.3-201ENST00000421145 199 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC112492.2-201ENST00000432774 1030 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC094019.1-201ENST00000434678 472 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 EMC3-AS1-205ENST00000438698 534 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC239798.3-201ENST00000454459 408 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC099670.1-201ENST00000455141 783 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AL022319.1-201ENST00000458183 1167 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 RN7SL39P-201ENST00000462264 297 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 MARK2P8-201ENST00000476069 952 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 HMGN1P16-201ENST00000508308 283 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 OR4D12P-201ENST00000509361 911 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 RPA2P3-201ENST00000533268 770 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AP001804.2-201ENST00000533932 910 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 RN7SL66P-201ENST00000582099 264 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC012368.3-201ENST00000604190 219 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 WBP1LP12-201ENST00000604449 331 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC011891.2-201ENST00000604949 397 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 RPL12P48-201ENST00000605620 304 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 SNORA74.4-201ENST00000607595 199 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 MIR7159-201ENST00000620587 66 ntBASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NHLRC1Q6VVB1 AC079753.1-201ENST00000623243 3868 ntBASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
NHLRC1Q6VVB1 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC092724.1-201ENST00000624623 3397 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 CDC27P2-201ENST00000425026 1922 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms