Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC013262.1-201ENST00000426710 252 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 BX119904.1-201ENST00000432026 348 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AL645939.3-201ENST00000435408 225 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AL157827.1-201ENST00000447622 132 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC108729.1-201ENST00000487812 947 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 BUD31P1-201ENST00000521828 359 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC005363.1-201ENST00000530779 351 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 PRELID3BP3-201ENST00000584963 545 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC073137.1-201ENST00000605636 634 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC019131.2-201ENST00000609071 870 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 MIR6778-201ENST00000617912 73 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AP003485.1-201ENST00000625093 753 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 SNORA16A-202ENST00000628458 135 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 OR4G3P-201ENST00000633500 913 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC099654.9-201ENST00000637055 678 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 CASC19-274ENST00000642018 970 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AL359715.4-201ENST00000606629 1436 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 ZNF658B-201ENST00000602828 3408 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL139384.2-201ENST00000613809 3590 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 RNA5SP321-201ENST00000362722 111 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL672167.2-201ENST00000377164 879 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 HMGB1P10-201ENST00000395823 563 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL121977.1-201ENST00000401636 979 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 MIR1282-201ENST00000408865 101 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL713922.1-201ENST00000416477 747 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 MTCYBP21-201ENST00000443300 1113 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 RPL5P13-201ENST00000462840 709 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 PFN1P8-201ENST00000497012 543 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 FTH1P8-201ENST00000498161 514 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC091849.1-201ENST00000509920 121 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 DUX4L52-201ENST00000549363 777 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 GLRXP2-201ENST00000555594 321 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC005632.2-201ENST00000564271 828 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 SNORD39.2-201ENST00000579995 76 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC091133.5-201ENST00000603088 301 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC096947.1-201ENST00000603233 470 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 OR1N1-202ENST00000619659 939 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC241377.1-201ENST00000619797 406 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC073592.6-201ENST00000624271 415 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 AC013488.1-201ENST00000526618 1838 ntBASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCDC144BQ3MJ40 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms