Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN20P56880 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 AL157831.2-201ENST00000564681 3095 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN20P56880 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN20P56880 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN20P56880 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 CASC19-255ENST00000641733 1385 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 RNA5SP279-201ENST00000365513 117 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC099535.1-201ENST00000408928 371 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 MTND4LP21-201ENST00000415303 295 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC106901.1-201ENST00000425086 698 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 TIMM8BP2-201ENST00000445940 251 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN20P56880 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 CR383656.1-201ENST00000484916 377 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN20P56880 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC112484.3-201ENST00000505910 329 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 RNA5SP441-201ENST00000516809 88 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 IGKV1D-22-201ENST00000518953 324 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 COX6B1P4-201ENST00000519826 484 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN20P56880 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN20P56880 OR1E3-201ENST00000575608 948 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN20P56880 AL136370.1-201ENST00000608166 691 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 MIR6811-201ENST00000620409 58 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AC004808.2-201ENST00000627965 773 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AC111152.1-202ENST00000635848 339 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 AL163152.1-201ENST00000642001 374 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 OR8A1-204ENST00000642111 1145 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN20P56880 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN20P56880 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN20P56880 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN20P56880 AC005725.1-201ENST00000577346 2607 ntBASIC5.73□□□□□ -1.49
CLDN20P56880 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN20P56880 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLDN20P56880 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 AL049634.1-201ENST00000453770 1720 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 AL607077.1-201ENST00000401718 499 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 RNA5SP198-201ENST00000410376 127 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 RNU6-564P-201ENST00000410983 104 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AC007064.3-201ENST00000422608 359 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 GAPDHP59-201ENST00000435908 267 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC104339.1-201ENST00000465478 348 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 SNRPCP3-201ENST00000474888 476 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 RN7SL369P-201ENST00000477138 299 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
CLDN20P56880 RN7SL714P-201ENST00000487050 298 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 RN7SL649P-201ENST00000496974 275 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC106800.3-201ENST00000511389 308 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC073916.1-201ENST00000545095 130 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 AL121579.2-201ENST00000555466 590 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.72□□□□□ -1.49
CLDN20P56880 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 MIR3154-201ENST00000577829 84 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 NPM1P45-201ENST00000583151 559 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 AC005332.4-201ENST00000592752 579 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms