Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 OR8G7P-201ENST00000616658 848 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 AC007671.1-201ENST00000616957 830 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 AC005514.1-201ENST00000623521 208 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.04□□□□□ -1.44
SUMO3P55854 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SUMO3P55854 AC004023.1-201ENST00000561473 1744 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 SALL4P7-201ENST00000555779 3120 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.04□□□□□ -1.44
SUMO3P55854 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.04□□□□□ -1.44
SUMO3P55854 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SUMO3P55854 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SUMO3P55854 AC062022.1-201ENST00000451026 1684 ntBASIC6.04□□□□□ -1.44
SUMO3P55854 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SUMO3P55854 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SUMO3P55854 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
SUMO3P55854 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SUMO3P55854 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 AC022819.1-201ENST00000563495 3910 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SUMO3P55854 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 RN7SKP118-201ENST00000364331 330 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SUMO3P55854 RN7SKP205-201ENST00000410999 307 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 RPS3AP25-201ENST00000411660 793 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AL445183.3-201ENST00000414168 502 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC009500.1-201ENST00000420684 583 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AL589794.1-201ENST00000424971 390 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 RPS7P2-201ENST00000435134 607 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.03□□□□□ -1.44
SUMO3P55854 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 AC022730.1-201ENST00000473114 568 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC079080.1-201ENST00000479841 822 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 RPS7P11-201ENST00000484240 586 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 RN7SL655P-201ENST00000486087 298 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 RN7SL37P-201ENST00000490461 307 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 HMGB1P38-201ENST00000490557 577 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.03□□□□□ -1.44
SUMO3P55854 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.03□□□□□ -1.44
SUMO3P55854 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 AP000662.1-201ENST00000530952 487 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.03□□□□□ -1.44
SUMO3P55854 AL049870.4-201ENST00000555741 486 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC010735.1-201ENST00000567305 1026 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 AP000919.1-202ENST00000581139 1264 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 BNIP3P38-201ENST00000601117 544 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AP002345.2-201ENST00000609961 904 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AL669942.2-201ENST00000620352 697 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC021422.1-201ENST00000621212 473 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 AC114546.4-201ENST00000624413 369 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 AC013488.1-201ENST00000526618 1838 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.03□□□□□ -1.44
SUMO3P55854 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 AC010132.4-201ENST00000569883 1368 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SUMO3P55854 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.03□□□□□ -1.44
SUMO3P55854 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.03□□□□□ -1.44
SUMO3P55854 AC009120.2-204ENST00000621548 2032 ntBASIC6.03□□□□□ -1.44
SUMO3P55854 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
SUMO3P55854 MROH3P-201ENST00000435735 2676 ntBASIC6.02□□□□□ -1.44
SUMO3P55854 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms