Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNA5SP156-201ENST00000410250 110 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.87□□□□□ -1.47
PKNOX1P55347 PPIAP32-201ENST00000449940 472 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.87□□□□□ -1.47
PKNOX1P55347 RBMY2HP-201ENST00000457961 720 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 ACA64.4-201ENST00000459070 127 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.87□□□□□ -1.47
PKNOX1P55347 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.87□□□□□ -1.47
PKNOX1P55347 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.87□□□□□ -1.47
PKNOX1P55347 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.87□□□□□ -1.47
PKNOX1P55347 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.87□□□□□ -1.47
PKNOX1P55347 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.87□□□□□ -1.47
PKNOX1P55347 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AL355974.3-201ENST00000617383 467 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 AC089999.3-201ENST00000622440 577 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 AP000550.3-201ENST00000637734 379 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 AC092451.3-201ENST00000625067 1343 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKNOX1P55347 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKNOX1P55347 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PKNOX1P55347 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.87□□□□□ -1.47
PKNOX1P55347 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PKNOX1P55347 AC005224.3-201ENST00000584683 2140 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKNOX1P55347 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PKNOX1P55347 AC239868.2-201ENST00000564237 4527 ntBASIC5.87□□□□□ -1.47
PKNOX1P55347 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 LINC01613-201ENST00000561476 2780 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC027279.4-201ENST00000624371 2072 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC090220.1-201ENST00000593078 1699 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AL592429.1-201ENST00000403909 1473 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PKNOX1P55347 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 U3.10-201ENST00000364459 214 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.86□□□□□ -1.47
PKNOX1P55347 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.86□□□□□ -1.47
PKNOX1P55347 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.86□□□□□ -1.47
PKNOX1P55347 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PKNOX1P55347 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PKNOX1P55347 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC245291.3-201ENST00000443400 292 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 RPS18P1-201ENST00000447840 458 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.86□□□□□ -1.47
PKNOX1P55347 OR56A7P-201ENST00000524865 941 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 AC021269.1-201ENST00000526860 705 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC005632.2-201ENST00000564271 828 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC006115.2-201ENST00000596823 202 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 MIR6885-201ENST00000612241 66 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 AC099654.15-201ENST00000639802 509 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 AC083837.1-201ENST00000565297 2994 ntBASIC5.86□□□□□ -1.47
PKNOX1P55347 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PKNOX1P55347 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PKNOX1P55347 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PKNOX1P55347 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PKNOX1P55347 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PKNOX1P55347 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.85□□□□□ -1.47
PKNOX1P55347 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PKNOX1P55347 NR1H5P-201ENST00000452683 1377 ntBASIC5.85□□□□□ -1.47
PKNOX1P55347 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 EIF3EP1-201ENST00000433978 1316 ntBASIC5.85□□□□□ -1.47
PKNOX1P55347 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 AC022325.1-201ENST00000502748 2199 ntBASIC5.85□□□□□ -1.47
PKNOX1P55347 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PKNOX1P55347 SNORA64.3-201ENST00000365647 134 ntBASIC5.85□□□□□ -1.47
PKNOX1P55347 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PKNOX1P55347 PSMA6P1-201ENST00000400275 741 ntBASIC5.85□□□□□ -1.47
PKNOX1P55347 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PKNOX1P55347 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.85□□□□□ -1.47
PKNOX1P55347 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.85□□□□□ -1.47
PKNOX1P55347 AL096829.1-201ENST00000413677 457 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms