Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC104843.2-201ENST00000427666 297 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 RPL23AP19-201ENST00000436229 369 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 VN1R110P-201ENST00000438988 971 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.67□□□□□ -1.34
CLCN3P51790 RNU6-775P-201ENST00000459318 96 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AC011476.1-201ENST00000466725 307 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AC007998.1-201ENST00000474156 672 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AC114728.1-201ENST00000488289 483 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 RPL7P51-201ENST00000490532 749 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.67□□□□□ -1.34
CLCN3P51790 WBP1LP3-201ENST00000523033 208 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 OR56A7P-201ENST00000524865 941 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.67□□□□□ -1.34
CLCN3P51790 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLCN3P51790 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.67□□□□□ -1.34
CLCN3P51790 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.67□□□□□ -1.34
CLCN3P51790 OR4H6P-201ENST00000563771 921 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.67□□□□□ -1.34
CLCN3P51790 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.67□□□□□ -1.34
CLCN3P51790 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.67□□□□□ -1.34
CLCN3P51790 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.67□□□□□ -1.34
CLCN3P51790 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLCN3P51790 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.67□□□□□ -1.34
CLCN3P51790 AP005431.1-201ENST00000618479 319 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AC103703.1-201ENST00000634783 663 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.67□□□□□ -1.34
CLCN3P51790 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLCN3P51790 AC092692.1-201ENST00000623625 2595 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CLCN3P51790 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLCN3P51790 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CLCN3P51790 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLCN3P51790 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CLCN3P51790 EPS15P1-202ENST00000459691 2071 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CLCN3P51790 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLCN3P51790 AC012254.3-201ENST00000591183 2117 ntBASIC6.67□□□□□ -1.34
CLCN3P51790 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 Z93929.1-201ENST00000418200 1475 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
CLCN3P51790 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 TET1P1-201ENST00000426627 2301 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.66□□□□□ -1.34
CLCN3P51790 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 OR10R3P-201ENST00000361688 942 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 RNA5SP284-201ENST00000384547 118 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.66□□□□□ -1.34
CLCN3P51790 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.66□□□□□ -1.34
CLCN3P51790 MTND6P12-201ENST00000428247 522 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.66□□□□□ -1.34
CLCN3P51790 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.66□□□□□ -1.34
CLCN3P51790 GEMIN2P1-201ENST00000454246 752 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 RN7SL165P-201ENST00000477476 291 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 AC023818.1-201ENST00000498379 384 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 MTATP6P1-201ENST00000514057 681 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 AC008676.3-201ENST00000521237 435 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.66□□□□□ -1.34
CLCN3P51790 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.66□□□□□ -1.34
CLCN3P51790 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLCN3P51790 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.66□□□□□ -1.34
CLCN3P51790 AL137918.1-201ENST00000624542 1922 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 DOCK11P1-201ENST00000553480 5932 ntBASIC6.66□□□□□ -1.34
CLCN3P51790 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.65□□□□□ -1.34
CLCN3P51790 AC079753.1-201ENST00000623243 3868 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 KARSP1-201ENST00000451871 1752 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CLCN3P51790 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
CLCN3P51790 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CLCN3P51790 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.65□□□□□ -1.34
CLCN3P51790 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 UBE2V2P1-201ENST00000434717 398 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms