Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CASP4P49662 RN7SKP77-201ENST00000363261 353 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RN7SKP187-201ENST00000365536 330 ntBASIC6.52□□□□□ -1.37
CASP4P49662 GNG5P2-201ENST00000372054 207 ntBASIC6.52□□□□□ -1.37
CASP4P49662 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 SNORA70.9-201ENST00000384370 135 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 MYL6P5-201ENST00000412707 459 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.52□□□□□ -1.37
CASP4P49662 USP24P1-201ENST00000433802 779 ntBASIC6.52□□□□□ -1.37
CASP4P49662 BX679664.2-201ENST00000439282 283 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RPSAP40-201ENST00000442343 891 ntBASIC6.52□□□□□ -1.37
CASP4P49662 TRIM60P16-201ENST00000444048 694 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RBMY2AP-201ENST00000445405 1157 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.52□□□□□ -1.37
CASP4P49662 AL445466.1-201ENST00000448432 357 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RBMY2CP-201ENST00000448575 1157 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RBMY2DP-202ENST00000448881 1157 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RBMY2BP-202ENST00000451071 1156 ntBASIC6.52□□□□□ -1.37
CASP4P49662 CTSLP6-201ENST00000458273 1002 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC104164.1-201ENST00000460282 590 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RN7SL168P-201ENST00000463821 279 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AP002884.1-201ENST00000479691 655 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RN7SL170P-201ENST00000487098 295 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RBBP4P1-201ENST00000502424 1276 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC122718.2-201ENST00000505325 591 ntBASIC6.52□□□□□ -1.37
CASP4P49662 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.52□□□□□ -1.37
CASP4P49662 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.52□□□□□ -1.37
CASP4P49662 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.52□□□□□ -1.37
CASP4P49662 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC110056.1-201ENST00000525759 911 ntBASIC6.52□□□□□ -1.37
CASP4P49662 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CASP4P49662 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 AC026826.3-201ENST00000561747 158 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC018558.5-201ENST00000565840 952 ntBASIC6.52□□□□□ -1.37
CASP4P49662 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 AP001437.1-201ENST00000608783 456 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC097641.3-201ENST00000613523 464 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC096708.4-201ENST00000620563 552 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC063952.1-203ENST00000634410 658 ntBASIC6.52□□□□□ -1.37
CASP4P49662 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.52□□□□□ -1.37
CASP4P49662 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 LYARP1-201ENST00000436977 1501 ntBASIC6.51□□□□□ -1.37
CASP4P49662 GNL2P1-201ENST00000451274 2190 ntBASIC6.51□□□□□ -1.37
CASP4P49662 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CASP4P49662 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 COX6B1P3-201ENST00000312310 260 ntBASIC6.51□□□□□ -1.37
CASP4P49662 RNFT1P3-201ENST00000340898 1052 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AC099535.1-201ENST00000408928 371 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AC092651.1-201ENST00000426110 312 ntBASIC6.51□□□□□ -1.37
CASP4P49662 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.51□□□□□ -1.37
CASP4P49662 RPS3AP38-201ENST00000435889 763 ntBASIC6.51□□□□□ -1.37
CASP4P49662 ATP5LP2-201ENST00000440646 311 ntBASIC6.51□□□□□ -1.37
CASP4P49662 RPS7P3-201ENST00000443360 580 ntBASIC6.51□□□□□ -1.37
CASP4P49662 Z83838.1-202ENST00000456225 839 ntBASIC6.51□□□□□ -1.37
CASP4P49662 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.51□□□□□ -1.37
CASP4P49662 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AC083795.1-201ENST00000491760 320 ntBASIC6.51□□□□□ -1.37
CASP4P49662 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.51□□□□□ -1.37
CASP4P49662 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.51□□□□□ -1.37
CASP4P49662 CYCSP38-201ENST00000559840 322 ntBASIC6.51□□□□□ -1.37
CASP4P49662 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.51□□□□□ -1.37
CASP4P49662 AC005224.3-201ENST00000584683 2140 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.51□□□□□ -1.37
CASP4P49662 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.51□□□□□ -1.37
CASP4P49662 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.51□□□□□ -1.37
CASP4P49662 MIR6809-201ENST00000612189 116 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AL021918.2-201ENST00000613415 194 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.51□□□□□ -1.37
CASP4P49662 AC016542.2-201ENST00000624201 619 ntBASIC6.51□□□□□ -1.37
CASP4P49662 AC073593.1-201ENST00000624500 411 ntBASIC6.51□□□□□ -1.37
CASP4P49662 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.51□□□□□ -1.37
CASP4P49662 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
CASP4P49662 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CASP4P49662 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.51□□□□□ -1.37
CASP4P49662 AC130304.1-201ENST00000622942 2385 ntBASIC6.51□□□□□ -1.37
CASP4P49662 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 RBPJP7-201ENST00000442803 1447 ntBASIC6.5□□□□□ -1.37
CASP4P49662 RBPJP5-201ENST00000449433 1447 ntBASIC6.5□□□□□ -1.37
CASP4P49662 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms