Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 AOX3P-204ENST00000491025 2107 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HNF4AP41235 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 AL672167.2-201ENST00000377164 879 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AL360271.1-201ENST00000395679 510 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AL133260.1-201ENST00000405720 405 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 RN7SKP146-201ENST00000410242 334 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 AC117434.1-201ENST00000419971 836 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AC002127.1-201ENST00000421305 225 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 RANP2-201ENST00000456833 229 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 RN7SL369P-201ENST00000477138 299 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AC117500.1-201ENST00000497352 755 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 RN7SKP34-201ENST00000516142 244 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 RPA2P3-201ENST00000533268 770 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.07□□□□□ -1.44
HNF4AP41235 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 WBP1LP12-201ENST00000604449 331 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AC011891.2-201ENST00000604949 397 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AL451049.1-201ENST00000608672 497 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.07□□□□□ -1.44
HNF4AP41235 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HNF4AP41235 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HNF4AP41235 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 HSPD1P7-201ENST00000447985 1686 ntBASIC6.07□□□□□ -1.44
HNF4AP41235 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.07□□□□□ -1.44
HNF4AP41235 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HNF4AP41235 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HNF4AP41235 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 CCNT2P1-201ENST00000423082 1315 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.06□□□□□ -1.44
HNF4AP41235 PRELID1P1-201ENST00000403549 660 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 MTND2P12-201ENST00000417560 1252 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 FAM183DP-201ENST00000421987 399 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HNF4AP41235 AC010086.1-201ENST00000437359 1052 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AL138787.1-202ENST00000437804 898 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 ARMC4P1-201ENST00000438905 707 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 RPS27AP3-201ENST00000453803 454 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 RPL7L1P3-201ENST00000455249 689 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AL022319.1-201ENST00000458183 1167 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.06□□□□□ -1.44
HNF4AP41235 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.06□□□□□ -1.44
HNF4AP41235 RN7SL326P-201ENST00000477493 296 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.06□□□□□ -1.44
HNF4AP41235 MORF4L2P1-201ENST00000503761 858 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 KHDC1P1-201ENST00000511053 508 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
HNF4AP41235 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.06□□□□□ -1.44
HNF4AP41235 CYCSP25-201ENST00000525280 316 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AP001000.1-201ENST00000526843 742 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.06□□□□□ -1.44
HNF4AP41235 OR4A40P-201ENST00000533878 948 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AP000619.2-201ENST00000546014 969 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.06□□□□□ -1.44
HNF4AP41235 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.06□□□□□ -1.44
HNF4AP41235 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.06□□□□□ -1.44
HNF4AP41235 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.06□□□□□ -1.44
HNF4AP41235 AL159169.2-201ENST00000610061 1269 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms