Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNA5SP375-201ENST00000362975 119 ntBASIC6.88□□□□□ -1.31
CIITAP33076 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 AC004386.1-201ENST00000393214 761 ntBASIC6.88□□□□□ -1.31
CIITAP33076 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.88□□□□□ -1.31
CIITAP33076 AC117434.1-201ENST00000419971 836 ntBASIC6.88□□□□□ -1.31
CIITAP33076 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AL512637.1-201ENST00000439523 1231 ntBASIC6.88□□□□□ -1.31
CIITAP33076 RSL24D1P2-201ENST00000445584 366 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AC016027.4-201ENST00000450866 277 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AC092865.4-201ENST00000477936 615 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.88□□□□□ -1.31
CIITAP33076 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.88□□□□□ -1.31
CIITAP33076 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.88□□□□□ -1.31
CIITAP33076 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.88□□□□□ -1.31
CIITAP33076 RNA5SP340-201ENST00000517132 107 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.88□□□□□ -1.31
CIITAP33076 AC007956.1-201ENST00000555623 542 ntBASIC6.88□□□□□ -1.31
CIITAP33076 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.88□□□□□ -1.31
CIITAP33076 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.88□□□□□ -1.31
CIITAP33076 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.88□□□□□ -1.31
CIITAP33076 AC108865.2-201ENST00000606881 432 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.88□□□□□ -1.31
CIITAP33076 MIR6809-201ENST00000612189 116 ntBASIC6.88□□□□□ -1.31
CIITAP33076 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.88□□□□□ -1.31
CIITAP33076 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.88□□□□□ -1.31
CIITAP33076 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.88□□□□□ -1.31
CIITAP33076 AC025262.3-201ENST00000623666 360 ntBASIC6.88□□□□□ -1.31
CIITAP33076 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.88□□□□□ -1.31
CIITAP33076 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
CIITAP33076 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.88□□□□□ -1.31
CIITAP33076 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CIITAP33076 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 CASC19-238ENST00000641523 1558 ntBASIC6.87□□□□□ -1.31
CIITAP33076 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 AC016583.1-201ENST00000624221 2431 ntBASIC6.87□□□□□ -1.31
CIITAP33076 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CIITAP33076 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.87□□□□□ -1.31
CIITAP33076 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 GNL2P1-201ENST00000451274 2190 ntBASIC6.87□□□□□ -1.31
CIITAP33076 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 SNORA11.5-201ENST00000408163 128 ntBASIC6.87□□□□□ -1.31
CIITAP33076 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.87□□□□□ -1.31
CIITAP33076 RN7SKP240-201ENST00000410583 375 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.87□□□□□ -1.31
CIITAP33076 RANP7-201ENST00000418085 644 ntBASIC6.87□□□□□ -1.31
CIITAP33076 GAPDHP75-201ENST00000433910 943 ntBASIC6.87□□□□□ -1.31
CIITAP33076 ATP5LP2-201ENST00000440646 311 ntBASIC6.87□□□□□ -1.31
CIITAP33076 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 RPL7L1P3-201ENST00000455249 689 ntBASIC6.87□□□□□ -1.31
CIITAP33076 CST12P-201ENST00000457644 362 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AL049829.1-201ENST00000465411 156 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC114728.1-201ENST00000488289 483 ntBASIC6.87□□□□□ -1.31
CIITAP33076 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.87□□□□□ -1.31
CIITAP33076 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.87□□□□□ -1.31
CIITAP33076 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.87□□□□□ -1.31
CIITAP33076 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.87□□□□□ -1.31
CIITAP33076 AC079905.1-201ENST00000549280 475 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC090236.2-201ENST00000587933 1101 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC015849.6-201ENST00000605454 474 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC108673.3-201ENST00000609183 335 ntBASIC6.87□□□□□ -1.31
CIITAP33076 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 AC245014.3-201ENST00000618589 347 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AL136228.1-201ENST00000622221 319 ntBASIC6.87□□□□□ -1.31
CIITAP33076 AC132825.8-201ENST00000640783 297 ntBASIC6.87□□□□□ -1.31
CIITAP33076 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CIITAP33076 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.87□□□□□ -1.31
CIITAP33076 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CIITAP33076 AC007114.2-201ENST00000576014 4281 ntBASIC6.87□□□□□ -1.31
CIITAP33076 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 RBPJP7-201ENST00000442803 1447 ntBASIC6.86□□□□□ -1.31
CIITAP33076 RBPJP5-201ENST00000449433 1447 ntBASIC6.86□□□□□ -1.31
CIITAP33076 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.86□□□□□ -1.31
CIITAP33076 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.86□□□□□ -1.31
CIITAP33076 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CIITAP33076 RNFT1P3-201ENST00000340898 1052 ntBASIC6.86□□□□□ -1.31
CIITAP33076 RAB5CP1-201ENST00000395972 580 ntBASIC6.86□□□□□ -1.31
CIITAP33076 AC015977.1-201ENST00000418887 292 ntBASIC6.86□□□□□ -1.31
CIITAP33076 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms