Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AKAP17BP-201ENST00000431706 2719 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
SLC6A4P31645 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SLC6A4P31645 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC110716.2-201ENST00000563865 3945 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 TMEM75-201ENST00000624314 2165 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SLC6A4P31645 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 OR4K17-201ENST00000315543 1032 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 RPL36P18-201ENST00000419316 318 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 MARK2P12-201ENST00000420129 585 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC108479.1-201ENST00000431142 427 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AL512637.2-201ENST00000431287 1256 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 MRPL50P1-201ENST00000431951 384 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 ZNF965P-201ENST00000432501 817 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC112492.2-201ENST00000432774 1030 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC094019.1-201ENST00000434678 472 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AL513321.1-201ENST00000441175 761 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 MOB1AP2-201ENST00000446060 614 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC016724.1-201ENST00000453215 421 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC118758.1-202ENST00000454719 225 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 CCNJP2-201ENST00000457810 1163 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 RN7SL643P-201ENST00000471845 291 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 RPL12P31-201ENST00000478433 450 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC021006.1-201ENST00000489849 553 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC023818.1-201ENST00000498379 384 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 UBE2V1P12-201ENST00000503954 474 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AC122718.2-201ENST00000505325 591 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 PCNAP1-201ENST00000505363 709 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 COX6B1P4-201ENST00000519826 484 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 IGHV4-55-201ENST00000520889 368 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 OR4V1P-201ENST00000525394 1140 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.57□□□□□ -1.36
SLC6A4P31645 MIMT1-201ENST00000597105 1050 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 SMIM12P1-201ENST00000603004 274 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AL133247.2-201ENST00000603236 482 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 MIR6811-201ENST00000620409 58 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 AP003476.1-201ENST00000623984 516 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 TMEM30CP-203ENST00000637814 1035 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC125238.2-201ENST00000430003 1440 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC073342.2-201ENST00000595842 1800 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SLC6A4P31645 AC011592.1-201ENST00000624647 3634 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.57□□□□□ -1.36
SLC6A4P31645 TMCC1P1-201ENST00000518897 1980 ntBASIC6.57□□□□□ -1.36
SLC6A4P31645 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SLC6A4P31645 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.56□□□□□ -1.36
SLC6A4P31645 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SLC6A4P31645 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SLC6A4P31645 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms