Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR6811-201ENST00000620409 58 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 AL049777.1-201ENST00000622740 518 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 MIR4302-201ENST00000638058 60 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CNGA1P29973 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.46□□□□□ -1.22
CNGA1P29973 LYARP1-201ENST00000436977 1501 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 AC017002.4-201ENST00000604721 1525 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 NEK2P2-201ENST00000438441 1338 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 MTND4P9-201ENST00000507819 1346 ntBASIC7.46□□□□□ -1.22
CNGA1P29973 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CNGA1P29973 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CNGA1P29973 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CNGA1P29973 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 CASC19-246ENST00000641625 1606 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.45□□□□□ -1.22
CNGA1P29973 RACGAP1P-201ENST00000550663 1879 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CNGA1P29973 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CNGA1P29973 SNORA63.3-201ENST00000362682 132 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 LCN1P2-201ENST00000372030 223 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 MARK2P12-201ENST00000420129 585 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 RPL12P16-201ENST00000431098 498 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 AC091390.2-201ENST00000432573 374 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AC010240.2-201ENST00000445363 1205 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 AC093770.1-201ENST00000511559 571 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 MTATP6P9-201ENST00000515039 680 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC7.45□□□□□ -1.22
CNGA1P29973 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 AC008521.2-201ENST00000591021 259 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 AC091768.1-201ENST00000609258 930 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 AC131009.3-201ENST00000621809 287 ntBASIC7.45□□□□□ -1.22
CNGA1P29973 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.45□□□□□ -1.22
CNGA1P29973 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CNGA1P29973 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.45□□□□□ -1.22
CNGA1P29973 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CNGA1P29973 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CNGA1P29973 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CNGA1P29973 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CNGA1P29973 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CNGA1P29973 AC096992.2-201ENST00000609553 1684 ntBASIC7.44□□□□□ -1.22
CNGA1P29973 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.44□□□□□ -1.22
CNGA1P29973 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.44□□□□□ -1.22
CNGA1P29973 AC093278.2-201ENST00000564956 2485 ntBASIC7.44□□□□□ -1.22
CNGA1P29973 AC008957.3-201ENST00000624112 2242 ntBASIC7.44□□□□□ -1.22
CNGA1P29973 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CNGA1P29973 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CNGA1P29973 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CNGA1P29973 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CNGA1P29973 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.44□□□□□ -1.22
CNGA1P29973 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.44□□□□□ -1.22
CNGA1P29973 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.44□□□□□ -1.22
CNGA1P29973 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.44□□□□□ -1.22
CNGA1P29973 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.44□□□□□ -1.22
CNGA1P29973 NPM1P38-201ENST00000403835 865 ntBASIC7.44□□□□□ -1.22
CNGA1P29973 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CNGA1P29973 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.44□□□□□ -1.22
CNGA1P29973 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.44□□□□□ -1.22
CNGA1P29973 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.44□□□□□ -1.22
CNGA1P29973 UBE2D3P3-201ENST00000426992 425 ntBASIC7.44□□□□□ -1.22
CNGA1P29973 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms