Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL390879.1-201ENST00000439143 386 ntBASIC8.49□□□□□ -1.05
RXRBP28702 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.49□□□□□ -1.05
RXRBP28702 MTCYBP12-201ENST00000440559 1134 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 OR6K5P-201ENST00000447050 945 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AC073909.1-201ENST00000447112 999 ntBASIC8.49□□□□□ -1.05
RXRBP28702 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 AL009048.1-201ENST00000450437 298 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AL606490.1-201ENST00000452266 765 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AL133372.1-201ENST00000493565 745 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AC074087.1-201ENST00000512059 724 ntBASIC8.49□□□□□ -1.05
RXRBP28702 IGHV4-55-201ENST00000520889 368 ntBASIC8.49□□□□□ -1.05
RXRBP28702 OR10D4P-201ENST00000525892 951 ntBASIC8.49□□□□□ -1.05
RXRBP28702 EMP1-206ENST00000537612 505 ntTSL 3 BASIC8.49□□□□□ -1.05
RXRBP28702 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.49□□□□□ -1.05
RXRBP28702 AC145350.1-201ENST00000567426 208 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.49□□□□□ -1.05
RXRBP28702 AC004232.1-201ENST00000571388 208 ntBASIC8.49□□□□□ -1.05
RXRBP28702 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.49□□□□□ -1.05
RXRBP28702 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC8.49□□□□□ -1.05
RXRBP28702 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.49□□□□□ -1.05
RXRBP28702 AC017104.5-201ENST00000637647 639 ntBASIC8.49□□□□□ -1.05
RXRBP28702 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 MTND4P34-201ENST00000572715 1371 ntBASIC8.48□□□□□ -1.05
RXRBP28702 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 AC087392.3-202ENST00000358446 1754 ntBASIC8.48□□□□□ -1.05
RXRBP28702 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
RXRBP28702 HIGD1AP15-201ENST00000416198 280 ntBASIC8.48□□□□□ -1.05
RXRBP28702 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.48□□□□□ -1.05
RXRBP28702 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 TNPO1P1-201ENST00000423641 1138 ntBASIC8.48□□□□□ -1.05
RXRBP28702 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.48□□□□□ -1.05
RXRBP28702 MED6P1-201ENST00000439659 713 ntBASIC8.48□□□□□ -1.05
RXRBP28702 MTND1P1-201ENST00000445453 368 ntBASIC8.48□□□□□ -1.05
RXRBP28702 RN7SL382P-201ENST00000482631 282 ntBASIC8.48□□□□□ -1.05
RXRBP28702 AC004453.1-201ENST00000487895 408 ntBASIC8.48□□□□□ -1.05
RXRBP28702 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC8.48□□□□□ -1.05
RXRBP28702 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 IGLVIV-66-1-201ENST00000521832 460 ntBASIC8.48□□□□□ -1.05
RXRBP28702 SCARNA9-201ENST00000530422 353 ntBASIC8.48□□□□□ -1.05
RXRBP28702 MIR4505-201ENST00000582238 73 ntBASIC8.48□□□□□ -1.05
RXRBP28702 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.48□□□□□ -1.05
RXRBP28702 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 AL163051.2-201ENST00000618976 735 ntBASIC8.48□□□□□ -1.05
RXRBP28702 AC096708.4-201ENST00000620563 552 ntBASIC8.48□□□□□ -1.05
RXRBP28702 AC068792.1-201ENST00000621354 417 ntBASIC8.48□□□□□ -1.05
RXRBP28702 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 AC007683.2-201ENST00000624681 714 ntBASIC8.48□□□□□ -1.05
RXRBP28702 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.48□□□□□ -1.05
RXRBP28702 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.48□□□□□ -1.05
RXRBP28702 AC007938.1-201ENST00000562524 2902 ntBASIC8.48□□□□□ -1.05
RXRBP28702 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC8.48□□□□□ -1.05
RXRBP28702 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
RXRBP28702 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RXRBP28702 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.48□□□□□ -1.05
RXRBP28702 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
RXRBP28702 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.47□□□□□ -1.05
RXRBP28702 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RXRBP28702 AC018765.1-201ENST00000623357 3446 ntBASIC8.47□□□□□ -1.05
RXRBP28702 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms