Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC023389.2-201ENST00000580031 955 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC010998.3-201ENST00000613871 631 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 AL683826.1-201ENST00000624104 627 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 CASC19-274ENST00000642018 970 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 LINC01613-201ENST00000561476 2780 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 EIF3EP1-201ENST00000433978 1316 ntBASIC4.65□□□□□ -1.67
HLA-DMBP28068 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DMBP28068 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DMBP28068 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC093671.1-201ENST00000624981 2929 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC018717.1-201ENST00000457712 1505 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 RNU1-65P-201ENST00000363919 148 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 GNG5P2-201ENST00000372054 207 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 CXADRP1-201ENST00000398098 1095 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 MTND2P12-201ENST00000417560 1252 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 RPL21P50-201ENST00000417698 477 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 MRPS21P2-201ENST00000424704 264 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 VN1R20P-201ENST00000425215 966 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 PPIAP10-201ENST00000438675 458 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 EMC3-AS1-205ENST00000438698 534 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 PCNPP2-201ENST00000441651 455 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 H3F3AP5-201ENST00000475267 429 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 RN7SL326P-201ENST00000477493 296 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 SNX18P24-201ENST00000505249 671 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 HMGN1P16-201ENST00000508308 283 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 SNORA74.1-201ENST00000516320 180 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 RNA5SP473-201ENST00000516402 125 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 TPM3P3-201ENST00000521343 354 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 CYCSP25-201ENST00000525280 316 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC107958.1-201ENST00000556576 290 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 MIR4271-201ENST00000582451 67 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 DYNLL1P1-201ENST00000595442 269 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 RPL12P48-201ENST00000605620 304 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 CXADRP3-202ENST00000617265 1100 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 AC024651.2-201ENST00000562480 2098 ntBASIC4.64□□□□□ -1.67
HLA-DMBP28068 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DMBP28068 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DMBP28068 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms