Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL352984.2-201ENST00000611153 546 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 AC003992.1-201ENST00000635364 557 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 AC119674.1-213ENST00000641177 1386 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 RBPJP7-201ENST00000442803 1447 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 RBPJP5-201ENST00000449433 1447 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 CCAT2-201ENST00000630920 1752 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 AOX3P-204ENST00000491025 2107 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 MARK2P4-201ENST00000503381 2380 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
COL8A2P25067 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 SNRPEP6-201ENST00000407465 277 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.1□□□□□ -1.59
COL8A2P25067 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 AL354890.1-201ENST00000413730 346 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.1□□□□□ -1.59
COL8A2P25067 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.1□□□□□ -1.59
COL8A2P25067 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.1□□□□□ -1.59
COL8A2P25067 GAPDHP75-201ENST00000433910 943 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.1□□□□□ -1.59
COL8A2P25067 NDUFS5P5-201ENST00000437256 321 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 VN1R110P-201ENST00000438988 971 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.1□□□□□ -1.59
COL8A2P25067 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 AC073109.1-201ENST00000445066 978 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 RN7SL269P-201ENST00000467795 305 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.1□□□□□ -1.59
COL8A2P25067 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.1□□□□□ -1.59
COL8A2P25067 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.1□□□□□ -1.59
COL8A2P25067 WBP1LP3-201ENST00000523033 208 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.1□□□□□ -1.59
COL8A2P25067 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 OR56A7P-201ENST00000524865 941 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL8A2P25067 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.1□□□□□ -1.59
COL8A2P25067 AC092121.1-201ENST00000569452 202 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.1□□□□□ -1.59
COL8A2P25067 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.1□□□□□ -1.59
COL8A2P25067 AC100767.2-201ENST00000604840 693 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 AC024589.2-201ENST00000605642 1294 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.1□□□□□ -1.59
COL8A2P25067 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL8A2P25067 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.1□□□□□ -1.59
COL8A2P25067 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
COL8A2P25067 GNL2P1-201ENST00000451274 2190 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC006511.3-201ENST00000624929 1783 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.09□□□□□ -1.59
COL8A2P25067 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.09□□□□□ -1.59
COL8A2P25067 RPL35AP3-201ENST00000414680 288 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC245884.2-201ENST00000426257 404 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 MRPS21P3-201ENST00000436696 262 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.09□□□□□ -1.59
COL8A2P25067 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC016027.4-201ENST00000450866 277 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms