Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC093635.1-201ENST00000609028 555 ntBASIC6.69□□□□□ -1.34
XPAP23025 AL096803.3-201ENST00000609032 532 ntBASIC6.69□□□□□ -1.34
XPAP23025 AC008759.3-201ENST00000613300 508 ntBASIC6.69□□□□□ -1.34
XPAP23025 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.69□□□□□ -1.34
XPAP23025 AC004241.2-201ENST00000614562 444 ntBASIC6.69□□□□□ -1.34
XPAP23025 AC019226.2-201ENST00000625973 424 ntBASIC6.69□□□□□ -1.34
XPAP23025 AL136531.3-201ENST00000624378 3658 ntBASIC6.69□□□□□ -1.34
XPAP23025 DDX18P6-201ENST00000450119 1997 ntBASIC6.69□□□□□ -1.34
XPAP23025 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.69□□□□□ -1.34
XPAP23025 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
XPAP23025 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
XPAP23025 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
XPAP23025 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.69□□□□□ -1.34
XPAP23025 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
XPAP23025 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.69□□□□□ -1.34
XPAP23025 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
XPAP23025 AC092725.2-201ENST00000567658 1389 ntBASIC6.69□□□□□ -1.34
XPAP23025 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 AC127070.3-201ENST00000503695 3263 ntBASIC6.68□□□□□ -1.34
XPAP23025 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.68□□□□□ -1.34
XPAP23025 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
XPAP23025 MTCO1P25-201ENST00000414449 1799 ntBASIC6.68□□□□□ -1.34
XPAP23025 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.68□□□□□ -1.34
XPAP23025 RANP4-201ENST00000413361 655 ntBASIC6.68□□□□□ -1.34
XPAP23025 AL158050.1-201ENST00000416077 457 ntBASIC6.68□□□□□ -1.34
XPAP23025 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 AC092106.2-201ENST00000436597 487 ntBASIC6.68□□□□□ -1.34
XPAP23025 AC096632.2-201ENST00000438139 1239 ntBASIC6.68□□□□□ -1.34
XPAP23025 NANOGP9-201ENST00000439890 892 ntBASIC6.68□□□□□ -1.34
XPAP23025 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.68□□□□□ -1.34
XPAP23025 CEACAMP5-201ENST00000448037 961 ntBASIC6.68□□□□□ -1.34
XPAP23025 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.68□□□□□ -1.34
XPAP23025 MTCO2P6-201ENST00000463134 685 ntBASIC6.68□□□□□ -1.34
XPAP23025 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.68□□□□□ -1.34
XPAP23025 AK4P6-201ENST00000505168 528 ntBASIC6.68□□□□□ -1.34
XPAP23025 SUMO2P5-201ENST00000506790 245 ntBASIC6.68□□□□□ -1.34
XPAP23025 NACAP5-201ENST00000509863 636 ntBASIC6.68□□□□□ -1.34
XPAP23025 OR52H2P-201ENST00000514607 902 ntBASIC6.68□□□□□ -1.34
XPAP23025 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 AC138517.1-201ENST00000515724 568 ntBASIC6.68□□□□□ -1.34
XPAP23025 RN7SKP287-201ENST00000516546 266 ntBASIC6.68□□□□□ -1.34
XPAP23025 MORF4L1P3-201ENST00000525966 950 ntBASIC6.68□□□□□ -1.34
XPAP23025 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.68□□□□□ -1.34
XPAP23025 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 AC023825.1-201ENST00000566704 1030 ntBASIC6.68□□□□□ -1.34
XPAP23025 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 VN1R87P-201ENST00000596706 487 ntBASIC6.68□□□□□ -1.34
XPAP23025 AF230666.2-201ENST00000602328 725 ntBASIC6.68□□□□□ -1.34
XPAP23025 AC093424.1-201ENST00000604999 338 ntBASIC6.68□□□□□ -1.34
XPAP23025 Z99289.3-201ENST00000605586 594 ntBASIC6.68□□□□□ -1.34
XPAP23025 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.68□□□□□ -1.34
XPAP23025 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.68□□□□□ -1.34
XPAP23025 Z99129.2-201ENST00000619967 314 ntBASIC6.68□□□□□ -1.34
XPAP23025 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 AC138907.10-201ENST00000623708 983 ntBASIC6.68□□□□□ -1.34
XPAP23025 AP000577.1-201ENST00000624366 878 ntBASIC6.68□□□□□ -1.34
XPAP23025 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.68□□□□□ -1.34
XPAP23025 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 AC112255.1-201ENST00000624070 2493 ntBASIC6.68□□□□□ -1.34
XPAP23025 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
XPAP23025 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
XPAP23025 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.67□□□□□ -1.34
XPAP23025 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.67□□□□□ -1.34
XPAP23025 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
XPAP23025 AC017002.4-201ENST00000604721 1525 ntBASIC6.67□□□□□ -1.34
XPAP23025 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.67□□□□□ -1.34
XPAP23025 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 DNM1P47-203ENST00000571780 12667 ntBASIC6.67□□□□□ -1.34
XPAP23025 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
XPAP23025 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms