Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.21□□□□□ -1.42
VCLP18206 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.21□□□□□ -1.42
VCLP18206 AC002519.2-203ENST00000567043 837 ntBASIC6.21□□□□□ -1.42
VCLP18206 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.21□□□□□ -1.42
VCLP18206 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.21□□□□□ -1.42
VCLP18206 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.21□□□□□ -1.42
VCLP18206 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.21□□□□□ -1.42
VCLP18206 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.21□□□□□ -1.42
VCLP18206 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.21□□□□□ -1.42
VCLP18206 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.21□□□□□ -1.42
VCLP18206 uc_338.31-201ENST00000615595 186 ntBASIC6.21□□□□□ -1.42
VCLP18206 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.21□□□□□ -1.42
VCLP18206 AL591926.1-201ENST00000620542 217 ntBASIC6.21□□□□□ -1.42
VCLP18206 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.21□□□□□ -1.42
VCLP18206 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.21□□□□□ -1.42
VCLP18206 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.21□□□□□ -1.42
VCLP18206 AC138627.1-204ENST00000641894 765 ntBASIC6.21□□□□□ -1.42
VCLP18206 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCLP18206 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.21□□□□□ -1.42
VCLP18206 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VCLP18206 AC020656.2-201ENST00000613291 5309 ntBASIC6.21□□□□□ -1.42
VCLP18206 AC025470.1-201ENST00000510053 2032 ntBASIC6.21□□□□□ -1.42
VCLP18206 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.21□□□□□ -1.42
VCLP18206 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VCLP18206 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VCLP18206 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
VCLP18206 AL137141.1-201ENST00000624622 4836 ntBASIC6.2□□□□□ -1.42
VCLP18206 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VCLP18206 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 MIPEPP2-201ENST00000422560 1819 ntBASIC6.2□□□□□ -1.42
VCLP18206 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VCLP18206 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.2□□□□□ -1.42
VCLP18206 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.2□□□□□ -1.42
VCLP18206 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VCLP18206 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 RN7SKP171-201ENST00000364417 303 ntBASIC6.2□□□□□ -1.42
VCLP18206 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
VCLP18206 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
VCLP18206 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.2□□□□□ -1.42
VCLP18206 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 AL354893.1-201ENST00000433735 348 ntBASIC6.2□□□□□ -1.42
VCLP18206 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.2□□□□□ -1.42
VCLP18206 AL022237.1-201ENST00000446663 358 ntBASIC6.2□□□□□ -1.42
VCLP18206 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.2□□□□□ -1.42
VCLP18206 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.2□□□□□ -1.42
VCLP18206 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.2□□□□□ -1.42
VCLP18206 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.2□□□□□ -1.42
VCLP18206 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.2□□□□□ -1.42
VCLP18206 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.2□□□□□ -1.42
VCLP18206 AP001267.4-201ENST00000602598 545 ntBASIC6.2□□□□□ -1.42
VCLP18206 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.2□□□□□ -1.42
VCLP18206 AC022726.2-201ENST00000634673 547 ntBASIC6.2□□□□□ -1.42
VCLP18206 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
VCLP18206 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
VCLP18206 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
VCLP18206 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCLP18206 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCLP18206 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.19□□□□□ -1.42
VCLP18206 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VCLP18206 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCLP18206 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VCLP18206 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VCLP18206 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
VCLP18206 AL161912.4-201ENST00000623889 2468 ntBASIC6.19□□□□□ -1.42
VCLP18206 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
VCLP18206 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VCLP18206 NLRP3P1-201ENST00000622303 1785 ntBASIC6.19□□□□□ -1.42
VCLP18206 AC005261.2-201ENST00000593427 4258 ntBASIC6.19□□□□□ -1.42
VCLP18206 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCLP18206 GUCY1B2-204ENST00000531898 1979 ntBASIC6.19□□□□□ -1.42
VCLP18206 RNU11-6P-201ENST00000391127 133 ntBASIC6.19□□□□□ -1.42
VCLP18206 YWHAZP6-201ENST00000399764 738 ntBASIC6.19□□□□□ -1.42
VCLP18206 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.19□□□□□ -1.42
VCLP18206 AC092865.3-201ENST00000425390 1026 ntBASIC6.19□□□□□ -1.42
VCLP18206 AC108479.1-201ENST00000431142 427 ntBASIC6.19□□□□□ -1.42
VCLP18206 AC094019.1-201ENST00000434678 472 ntBASIC6.19□□□□□ -1.42
VCLP18206 NPM1P48-201ENST00000436002 853 ntBASIC6.19□□□□□ -1.42
VCLP18206 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.19□□□□□ -1.42
VCLP18206 MORF4-201ENST00000447135 971 ntBASIC6.19□□□□□ -1.42
VCLP18206 HMGB1P7-201ENST00000450921 612 ntBASIC6.19□□□□□ -1.42
VCLP18206 AC103563.5-201ENST00000455643 364 ntBASIC6.19□□□□□ -1.42
VCLP18206 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.19□□□□□ -1.42
VCLP18206 AC106822.1-201ENST00000502647 526 ntBASIC6.19□□□□□ -1.42
VCLP18206 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.19□□□□□ -1.42
VCLP18206 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.19□□□□□ -1.42
VCLP18206 MAST4-IT1-201ENST00000514241 658 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms