Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.75□□□□□ -1.17
COL5A2P05997 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
COL5A2P05997 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.75□□□□□ -1.17
COL5A2P05997 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.75□□□□□ -1.17
COL5A2P05997 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 AL133270.1-201ENST00000402635 279 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 HMGA1P8-201ENST00000414130 321 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.75□□□□□ -1.17
COL5A2P05997 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.75□□□□□ -1.17
COL5A2P05997 AC245047.2-201ENST00000441060 530 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 RPS26P41-201ENST00000450370 284 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AL450023.1-201ENST00000450868 751 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AC103563.5-201ENST00000455643 364 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 RPL35AP28-201ENST00000459730 331 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.75□□□□□ -1.17
COL5A2P05997 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.75□□□□□ -1.17
COL5A2P05997 RBM22P12-201ENST00000567098 1255 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.75□□□□□ -1.17
COL5A2P05997 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.74□□□□□ -1.17
COL5A2P05997 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 TNPO1P2-201ENST00000426249 2665 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 U8.4-201ENST00000363626 134 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 MIR640-201ENST00000385086 96 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.74□□□□□ -1.17
COL5A2P05997 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.74□□□□□ -1.17
COL5A2P05997 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 FAR2P1-206ENST00000449736 709 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 AURKAPS1-201ENST00000451805 1212 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 RPL38P3-201ENST00000484463 213 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 AC139365.2-201ENST00000517972 253 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 OR8G3P-201ENST00000533406 921 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.74□□□□□ -1.17
COL5A2P05997 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.74□□□□□ -1.17
COL5A2P05997 OR4H6P-201ENST00000563771 921 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.74□□□□□ -1.17
COL5A2P05997 AP002884.5-201ENST00000595053 1132 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 AC013731.1-201ENST00000604340 883 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.74□□□□□ -1.17
COL5A2P05997 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.74□□□□□ -1.17
COL5A2P05997 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL5A2P05997 PARP4P1-201ENST00000435945 2337 ntBASIC7.74□□□□□ -1.17
COL5A2P05997 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
COL5A2P05997 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL5A2P05997 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.73□□□□□ -1.17
COL5A2P05997 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL5A2P05997 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
COL5A2P05997 UGT2B27P-201ENST00000505092 1620 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.73□□□□□ -1.17
COL5A2P05997 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
COL5A2P05997 AC087516.1-201ENST00000561236 2428 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.73□□□□□ -1.17
COL5A2P05997 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.73□□□□□ -1.17
COL5A2P05997 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL5A2P05997 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.73□□□□□ -1.17
COL5A2P05997 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.73□□□□□ -1.17
COL5A2P05997 RN7SKP115-201ENST00000363177 317 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 RNU1-24P-201ENST00000364285 165 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.73□□□□□ -1.17
COL5A2P05997 AC099521.1-201ENST00000482557 334 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 AC073610.1-201ENST00000489971 396 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.73□□□□□ -1.17
COL5A2P05997 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.73□□□□□ -1.17
COL5A2P05997 HSPE1P2-201ENST00000554777 306 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 AC004825.1-201ENST00000555068 586 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 RN7SL708P-201ENST00000580952 299 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 MIR4260-201ENST00000583107 67 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.73□□□□□ -1.17
COL5A2P05997 AL390318.1-201ENST00000624564 687 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL5A2P05997 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.73□□□□□ -1.17
COL5A2P05997 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
COL5A2P05997 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms