Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 RN7SL366P-201ENST00000577957 292 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC083760.1-201ENST00000589621 670 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC129492.5-201ENST00000603489 315 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC091946.2-201ENST00000606105 291 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC009283.1-201ENST00000615852 645 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC004836.1-201ENST00000623032 634 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.29□□□□□ -1.24
PDGFAP04085 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PDGFAP04085 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 AL512504.2-201ENST00000445455 1909 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
PDGFAP04085 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PDGFAP04085 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 RNU1-16P-201ENST00000365477 164 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
PDGFAP04085 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PDGFAP04085 AL080285.1-201ENST00000404225 984 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 MTCO3P31-201ENST00000405526 789 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 RPL21P108-201ENST00000413857 481 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 RPS7P13-201ENST00000413955 498 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.28□□□□□ -1.24
PDGFAP04085 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 RPL5P6-201ENST00000425640 886 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.28□□□□□ -1.24
PDGFAP04085 AF274573.1-201ENST00000430535 494 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 MTND1P2-201ENST00000430604 821 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.28□□□□□ -1.24
PDGFAP04085 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 ARL5AP2-201ENST00000444698 533 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 VN1R34P-201ENST00000447387 883 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 RPL23AP35-201ENST00000451906 501 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 AL590326.1-201ENST00000460857 334 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 FTH1P4-201ENST00000480365 553 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 RPL4P1-201ENST00000496596 1278 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 PRDX4P1-201ENST00000507189 574 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 IGKV1D-32-201ENST00000517449 318 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 AC025881.1-201ENST00000518851 512 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.28□□□□□ -1.24
PDGFAP04085 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.28□□□□□ -1.24
PDGFAP04085 SSU72P6-201ENST00000532644 488 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 OR6C7P-201ENST00000547875 934 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 ZNF519P2-201ENST00000557032 169 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 AC091304.4-201ENST00000565703 620 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 MIR3680-2-201ENST00000578247 87 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 MIR3680-1-201ENST00000581433 87 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.28□□□□□ -1.24
PDGFAP04085 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 AC010385.2-201ENST00000603743 490 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 AP002360.3-201ENST00000607673 710 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 MIR6883-201ENST00000614952 78 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 TUG1_3.1-201ENST00000616187 237 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.28□□□□□ -1.24
PDGFAP04085 LINC01739-205ENST00000641890 573 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms