Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.17□□□□□ -1.26
COL1A1P02452 AC009948.3-201ENST00000603415 1798 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 AC053481.2-202ENST00000582394 1500 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 PARP4P2-201ENST00000446672 3326 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL1A1P02452 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.17□□□□□ -1.26
COL1A1P02452 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.17□□□□□ -1.26
COL1A1P02452 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.17□□□□□ -1.26
COL1A1P02452 RN7SL515P-201ENST00000463999 297 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AL035690.1-201ENST00000490892 383 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.17□□□□□ -1.26
COL1A1P02452 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 GARSP1-201ENST00000570895 719 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 IMMP1LP3-201ENST00000604197 224 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AC004890.3-201ENST00000605566 1095 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.17□□□□□ -1.26
COL1A1P02452 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL1A1P02452 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL1A1P02452 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL1A1P02452 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 OR5W1P-201ENST00000423705 938 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 AC126120.1-201ENST00000431082 470 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 SBDSP1-204ENST00000453858 737 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 AC083795.1-201ENST00000491760 320 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 GAPDHP71-201ENST00000511530 1003 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.16□□□□□ -1.26
COL1A1P02452 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.16□□□□□ -1.26
COL1A1P02452 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.16□□□□□ -1.26
COL1A1P02452 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL1A1P02452 AC027667.1-201ENST00000545814 304 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.16□□□□□ -1.26
COL1A1P02452 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.16□□□□□ -1.26
COL1A1P02452 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.16□□□□□ -1.26
COL1A1P02452 AC008536.1-201ENST00000602872 669 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 AC211433.2-201ENST00000608433 387 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.16□□□□□ -1.26
COL1A1P02452 AC079395.2-201ENST00000610982 737 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 RN7SL544P-201ENST00000617232 284 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 RN7SL763P-201ENST00000620922 284 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 AP001885.1-201ENST00000621658 558 ntBASIC7.16□□□□□ -1.26
COL1A1P02452 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.15□□□□□ -1.26
COL1A1P02452 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 AL359195.2-201ENST00000623657 4412 ntBASIC7.15□□□□□ -1.26
COL1A1P02452 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
COL1A1P02452 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.15□□□□□ -1.26
COL1A1P02452 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL1A1P02452 RN7SKP162-201ENST00000363605 345 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 RNA5SP394-201ENST00000364216 119 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL1A1P02452 NPM1P4-201ENST00000414095 812 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.15□□□□□ -1.27
COL1A1P02452 AC007562.1-201ENST00000421819 517 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 AL663074.2-201ENST00000440621 479 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 AC079922.1-201ENST00000443291 359 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 AC023274.2-201ENST00000445264 521 ntBASIC7.15□□□□□ -1.27
COL1A1P02452 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL1A1P02452 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.15□□□□□ -1.27
COL1A1P02452 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL1A1P02452 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.15□□□□□ -1.27
COL1A1P02452 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL1A1P02452 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms