Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC008555.7-201ENST00000605008 583 ntBASIC6.43□□□□□ -1.38
MSI1O43347 KATNBL1P1-201ENST00000605192 748 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AC024589.2-201ENST00000605642 1294 ntBASIC6.43□□□□□ -1.38
MSI1O43347 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.43□□□□□ -1.38
MSI1O43347 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 RN7SL261P-201ENST00000613441 282 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AC004801.6-201ENST00000616571 978 ntBASIC6.43□□□□□ -1.38
MSI1O43347 FAM27E2-201ENST00000619668 403 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AP001885.1-201ENST00000621658 558 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 DOCK11P1-201ENST00000553480 5932 ntBASIC6.43□□□□□ -1.38
MSI1O43347 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 AC024651.2-201ENST00000562480 2098 ntBASIC6.43□□□□□ -1.38
MSI1O43347 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 HDAC1P2-201ENST00000453661 1398 ntBASIC6.43□□□□□ -1.38
MSI1O43347 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 AC119674.1-213ENST00000641177 1386 ntBASIC6.43□□□□□ -1.38
MSI1O43347 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 AC011416.1-201ENST00000514947 1732 ntBASIC6.42□□□□□ -1.38
MSI1O43347 LINC01616-201ENST00000561816 2280 ntBASIC6.42□□□□□ -1.38
MSI1O43347 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MSI1O43347 SNORA21-201ENST00000362423 132 ntBASIC6.42□□□□□ -1.38
MSI1O43347 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.42□□□□□ -1.38
MSI1O43347 MIR130B-202ENST00000385018 82 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AL132875.1-201ENST00000403623 949 ntBASIC6.42□□□□□ -1.38
MSI1O43347 RNA5SP156-201ENST00000410250 110 ntBASIC6.42□□□□□ -1.38
MSI1O43347 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.42□□□□□ -1.38
MSI1O43347 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.42□□□□□ -1.38
MSI1O43347 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.42□□□□□ -1.38
MSI1O43347 EIF2S2P3-201ENST00000428356 999 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AC002069.1-201ENST00000429649 1159 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 AL353662.1-201ENST00000439099 327 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AC002553.3-201ENST00000453002 341 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AC103563.5-201ENST00000455643 364 ntBASIC6.42□□□□□ -1.38
MSI1O43347 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.42□□□□□ -1.38
MSI1O43347 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 AC090958.1-201ENST00000511122 351 ntBASIC6.42□□□□□ -1.38
MSI1O43347 CR383658.1-201ENST00000514609 734 ntBASIC6.42□□□□□ -1.38
MSI1O43347 RNA5SP434-201ENST00000516647 121 ntBASIC6.42□□□□□ -1.38
MSI1O43347 RNU6-467P-201ENST00000517027 110 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.42□□□□□ -1.38
MSI1O43347 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.42□□□□□ -1.38
MSI1O43347 AL137067.2-201ENST00000621202 131 ntBASIC6.42□□□□□ -1.38
MSI1O43347 AL139254.3-201ENST00000641097 674 ntBASIC6.42□□□□□ -1.38
MSI1O43347 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.42□□□□□ -1.38
MSI1O43347 TET1P1-201ENST00000426627 2301 ntBASIC6.42□□□□□ -1.38
MSI1O43347 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSI1O43347 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 AC022325.1-201ENST00000502748 2199 ntBASIC6.41□□□□□ -1.38
MSI1O43347 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
MSI1O43347 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.41□□□□□ -1.38
MSI1O43347 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSI1O43347 OR7E25P-201ENST00000344844 931 ntBASIC6.41□□□□□ -1.38
MSI1O43347 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.41□□□□□ -1.38
MSI1O43347 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.41□□□□□ -1.38
MSI1O43347 RN7SKP240-201ENST00000410583 375 ntBASIC6.41□□□□□ -1.38
MSI1O43347 AC130360.1-201ENST00000425489 1117 ntBASIC6.41□□□□□ -1.38
MSI1O43347 AC115283.1-201ENST00000427353 400 ntBASIC6.41□□□□□ -1.38
MSI1O43347 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.41□□□□□ -1.38
MSI1O43347 AC110602.1-201ENST00000437414 318 ntBASIC6.41□□□□□ -1.38
MSI1O43347 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms