Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CUX2O14529 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC10.26□□□□□ -0.77
CUX2O14529 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 AC009120.2-204ENST00000621548 2032 ntBASIC10.25□□□□□ -0.77
CUX2O14529 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CUX2O14529 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 HMGB3P24-201ENST00000433260 622 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AL138878.2-201ENST00000440581 1241 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC10.25□□□□□ -0.77
CUX2O14529 HNRNPDLP2-201ENST00000455248 751 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AC096741.1-201ENST00000472250 846 ntBASIC10.25□□□□□ -0.77
CUX2O14529 RN7SL459P-201ENST00000481078 302 ntBASIC10.25□□□□□ -0.77
CUX2O14529 IGLV2-34-201ENST00000490007 283 ntBASIC10.25□□□□□ -0.77
CUX2O14529 NPM1P27-201ENST00000502784 830 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC10.25□□□□□ -0.77
CUX2O14529 AC136624.4-201ENST00000573044 370 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AC010245.2-201ENST00000606908 1167 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AC009163.6-201ENST00000612367 342 ntBASIC10.25□□□□□ -0.77
CUX2O14529 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC10.25□□□□□ -0.77
CUX2O14529 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CUX2O14529 AC105114.1-201ENST00000624795 1862 ntBASIC10.25□□□□□ -0.77
CUX2O14529 MALAT1-202ENST00000534336 8708 ntBASIC10.25□□□□□ -0.77
CUX2O14529 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC10.25□□□□□ -0.77
CUX2O14529 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC10.25□□□□□ -0.77
CUX2O14529 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC10.25□□□□□ -0.77
CUX2O14529 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CUX2O14529 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 OR11H13P-201ENST00000359695 979 ntBASIC10.24□□□□□ -0.77
CUX2O14529 RN7SKP77-201ENST00000363261 353 ntBASIC10.24□□□□□ -0.77
CUX2O14529 Y_RNA.126-201ENST00000363382 111 ntBASIC10.24□□□□□ -0.77
CUX2O14529 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC10.24□□□□□ -0.77
CUX2O14529 IGKV1OR22-5-201ENST00000458718 354 ntBASIC10.24□□□□□ -0.77
CUX2O14529 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC10.24□□□□□ -0.77
CUX2O14529 RN7SL591P-201ENST00000496150 292 ntBASIC10.24□□□□□ -0.77
CUX2O14529 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC10.24□□□□□ -0.77
CUX2O14529 AC110056.1-201ENST00000525759 911 ntBASIC10.24□□□□□ -0.77
CUX2O14529 AC209154.1-201ENST00000582156 337 ntBASIC10.24□□□□□ -0.77
CUX2O14529 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC10.24□□□□□ -0.77
CUX2O14529 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC10.24□□□□□ -0.77
CUX2O14529 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CUX2O14529 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 AL359976.1-201ENST00000418655 3528 ntBASIC10.24□□□□□ -0.77
CUX2O14529 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC10.24□□□□□ -0.77
CUX2O14529 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CUX2O14529 RN7SKP113-201ENST00000363891 295 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AC068538.1-201ENST00000376856 336 ntBASIC10.23□□□□□ -0.77
CUX2O14529 RN7SKP166-201ENST00000410812 305 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AL096829.1-201ENST00000413677 457 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AL590139.1-201ENST00000416267 400 ntBASIC10.23□□□□□ -0.77
CUX2O14529 RPS15AP30-201ENST00000420976 390 ntBASIC10.23□□□□□ -0.77
CUX2O14529 RPS27AP6-201ENST00000427962 448 ntBASIC10.23□□□□□ -0.77
CUX2O14529 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC10.23□□□□□ -0.77
CUX2O14529 AC092824.1-201ENST00000483524 576 ntBASIC10.23□□□□□ -0.77
CUX2O14529 SNORA58-201ENST00000505219 137 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC10.23□□□□□ -0.77
CUX2O14529 AC010343.2-201ENST00000510162 224 ntBASIC10.23□□□□□ -0.77
CUX2O14529 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC10.23□□□□□ -0.77
CUX2O14529 AL450226.2-201ENST00000622913 439 ntBASIC10.23□□□□□ -0.77
CUX2O14529 OR7A1P-202ENST00000641542 1158 ntBASIC10.23□□□□□ -0.77
CUX2O14529 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CUX2O14529 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CUX2O14529 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC10.23□□□□□ -0.77
CUX2O14529 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CUX2O14529 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC10.23□□□□□ -0.77
CUX2O14529 SNRPEP6-201ENST00000407465 277 ntBASIC10.23□□□□□ -0.77
CUX2O14529 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC10.23□□□□□ -0.77
CUX2O14529 RPS3AP15-201ENST00000483874 781 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AC114728.1-201ENST00000488289 483 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AC109462.1-201ENST00000491087 368 ntBASIC10.23□□□□□ -0.77
CUX2O14529 AC095057.1-201ENST00000507583 168 ntBASIC10.23□□□□□ -0.77
CUX2O14529 BRD9P1-201ENST00000529855 560 ntBASIC10.23□□□□□ -0.77
CUX2O14529 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms