Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM38O00635 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 AC012078.1-201ENST00000405035 1646 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TRIM38O00635 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM38O00635 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 AC006213.6-201ENST00000623722 4179 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 AC003045.1-201ENST00000398779 713 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 RN7SKP240-201ENST00000410583 375 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 RNA5SP251-201ENST00000410614 137 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 RPL23AP18-201ENST00000416139 468 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AL663061.1-201ENST00000416625 580 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AC099782.1-201ENST00000425889 474 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AC239367.3-201ENST00000428996 814 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC245452.2-201ENST00000435222 392 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM38O00635 EIF5AP4-201ENST00000441206 465 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AL355355.1-201ENST00000442900 793 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 HMGN1P2-201ENST00000445197 310 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 COX4I1P2-201ENST00000447446 547 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 MGAT2P1-201ENST00000449718 797 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 GOLGA5P1-201ENST00000507317 980 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AC008628.1-201ENST00000508663 265 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 RN7SKP248-201ENST00000516278 305 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 IGHV3-57-201ENST00000520143 280 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 IGLV3-6-201ENST00000523937 250 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 OR5D2P-201ENST00000524390 911 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM38O00635 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC116158.1-201ENST00000560231 2129 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 MIR4502-201ENST00000580432 81 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 SYPL1P2-201ENST00000582878 727 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM38O00635 SMIM12P1-201ENST00000603004 274 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AL359742.1-201ENST00000622497 540 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AP001052.1-201ENST00000626421 99 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 AC073488.9-201ENST00000631601 754 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
TRIM38O00635 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM38O00635 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM38O00635 AC068769.1-201ENST00000474767 2426 ntBASIC6.48□□□□□ -1.37
TRIM38O00635 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM38O00635 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM38O00635 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM38O00635 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM38O00635 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 Z97989.1-201ENST00000531702 2421 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 SNX18P3-202ENST00000565670 1750 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 RNA5SP433-201ENST00000364491 114 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 MRPS6P2-201ENST00000381143 370 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC007568.1-201ENST00000422912 471 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 RNF19BPX-201ENST00000426224 625 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AC108479.1-201ENST00000431142 427 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms