Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL929601.4-201ENST00000613011 1341 ntBASIC7.15□□□□□ -1.26
CCDC66A2RUB6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC66A2RUB6 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 ATP5BP1-201ENST00000411980 1574 ntBASIC7.15□□□□□ -1.27
CCDC66A2RUB6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.15□□□□□ -1.27
CCDC66A2RUB6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 MIR133A2-201ENST00000347538 102 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RNU5E-10P-201ENST00000363506 118 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RN7SKP257-201ENST00000364525 309 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 U3.14-201ENST00000365363 227 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RNA5SP53-201ENST00000391299 120 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RN7SKP188-201ENST00000410789 317 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RNU4-27P-201ENST00000410889 139 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 SEPT7P8-201ENST00000413308 775 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 NIFKP3-201ENST00000417799 865 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 TCEA1P2-201ENST00000420496 906 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC134879.1-201ENST00000426062 394 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 SETP8-201ENST00000435341 628 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RPL29P7-201ENST00000440227 457 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RPL7P33-201ENST00000444159 742 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL354714.5-201ENST00000450131 590 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL009048.1-201ENST00000450437 298 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 GOT2P2-201ENST00000450663 1251 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 RPSAP48-201ENST00000466509 889 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 MARK2P8-201ENST00000476069 952 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL928654.1-201ENST00000476081 354 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC005412.2-201ENST00000492004 341 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 PPM1AP1-201ENST00000502740 1135 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC069306.1-201ENST00000507006 843 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC005351.1-201ENST00000511152 786 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 DUXAP5-201ENST00000529668 529 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC087894.1-201ENST00000538359 518 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AP001160.4-201ENST00000596971 382 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AF230666.2-201ENST00000602328 725 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC005070.2-201ENST00000604391 260 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL049840.6-201ENST00000604583 345 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL035410.2-201ENST00000604963 864 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AC139792.1-201ENST00000607051 647 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 FKBP1AP4-201ENST00000631775 336 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 AL355834.1-201ENST00000556602 3965 ntBASIC7.14□□□□□ -1.27
CCDC66A2RUB6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC66A2RUB6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC66A2RUB6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms