Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AL365220.1-201ENST00000432923 399 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 KF459542.1-201ENST00000450908 553 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 DEFB109A-201ENST00000482450 265 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AL035690.1-201ENST00000490892 383 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 NATP-201ENST00000523491 878 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 NPM1P42-201ENST00000560329 862 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 MT1CP-201ENST00000567054 174 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 MIR744-201ENST00000578242 98 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC027229.1-201ENST00000583887 253 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC012368.3-201ENST00000604190 219 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AL136097.3-201ENST00000611097 505 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC003992.1-201ENST00000635364 557 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AC010325.3-201ENST00000641084 394 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AOX3P-204ENST00000491025 2107 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AP001541.1-201ENST00000623322 1904 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 SNORA43.1-201ENST00000364863 140 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AL139805.1-201ENST00000407837 289 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 RN7SKP144-201ENST00000411108 279 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 MTND2P12-201ENST00000417560 1252 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 IGLV3-4-201ENST00000432300 244 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC094019.1-201ENST00000434678 472 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 LINC00328-2P-201ENST00000436585 219 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 PPIAP10-201ENST00000438675 458 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 ARMC4P1-201ENST00000438905 707 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 KRT8P51-201ENST00000438938 274 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AL645936.1-201ENST00000441979 518 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 RPS27AP3-201ENST00000453803 454 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 H3F3AP5-201ENST00000475267 429 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 RN7SL104P-201ENST00000498686 293 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 RNA5SP206-201ENST00000516703 121 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AP001858.2-201ENST00000536213 601 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 NPIPB1P-202ENST00000588786 828 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC015819.1-201ENST00000613588 663 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC012676.3-201ENST00000614983 479 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC069234.4-201ENST00000621276 412 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms