Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MTCYBP24-201ENST00000420387 1106 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC126124.1-201ENST00000426104 185 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL3P8-201ENST00000432928 1191 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC093716.1-201ENST00000435923 377 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC239367.2-201ENST00000447309 705 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AL118496.2-201ENST00000448300 230 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 NUTF2P4-201ENST00000458353 381 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL5P17-201ENST00000469685 877 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 PIGFP1-201ENST00000519180 653 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 SOX5-213ENST00000541847 758 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 CYP4A26P-201ENST00000563017 196 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL23AP77-201ENST00000588044 463 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AP000907.4-201ENST00000604143 237 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC091834.1-201ENST00000614543 472 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MIR6754-201ENST00000621121 66 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MIR6834-201ENST00000622807 81 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC124944.3-204ENST00000641191 150 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 RPS4XP5-202ENST00000449995 1334 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 NBPF25P-201ENST00000606775 2019 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 FMO10P-201ENST00000455032 1493 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 HSPD1P9-201ENST00000420325 1636 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC103591.2-201ENST00000265259 766 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 TMSB4XP2-201ENST00000335179 210 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 Y_RNA.453-201ENST00000384223 109 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-77P-201ENST00000410554 91 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC009237.5-201ENST00000414271 501 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AL365184.2-201ENST00000431139 435 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AL122003.1-201ENST00000435206 784 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 Z99127.3-201ENST00000448158 395 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 PSPHP1-201ENST00000450062 261 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL687P-201ENST00000480496 285 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL65P-201ENST00000485221 315 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 ACTG1P20-201ENST00000486001 468 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 SNRPD2P1-201ENST00000489253 354 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC108941.1-201ENST00000502853 530 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL7L1P4-201ENST00000513004 707 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-507P-201ENST00000516045 100 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC008802.1-201ENST00000519121 791 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC011453.2-201ENST00000603737 729 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC087045.1-201ENST00000605856 382 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL840P-201ENST00000606883 284 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC024560.3-201ENST00000608482 349 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC064836.2-201ENST00000609491 462 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 RNVU1-19-201ENST00000613023 167 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 FRG2MP-201ENST00000613317 856 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC138649.3-201ENST00000622154 254 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms