Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 POLR2KP1-201ENST00000553226 168 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC124068.1-201ENST00000563131 678 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RNU6-87P-201ENST00000607561 108 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC023983.2-201ENST00000608010 562 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC093635.1-201ENST00000609028 555 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC096772.1-201ENST00000609146 564 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 MTCO1P14-201ENST00000441695 1559 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 DHFR2-206ENST00000619045 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 SCIMP-202ENST00000571800 2155 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC012640.4-201ENST00000606194 2550 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 TXLNGY-203ENST00000445715 1915 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC008507.5-201ENST00000624591 1969 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 FAM32BP-201ENST00000344033 333 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.5-201ENST00000362334 102 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.301-201ENST00000364990 103 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 COQ3-202ENST00000369240 646 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AL583835.1-201ENST00000399570 407 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC092745.2-202ENST00000411880 369 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC018865.2-201ENST00000423631 129 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 OR5M13P-201ENST00000433944 937 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AL391825.1-202ENST00000458136 741 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.653-201ENST00000459091 95 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 SEM1-210ENST00000488005 775 ntTSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC013356.1-201ENST00000489027 564 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 OR4A7P-201ENST00000531463 910 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 NMNAT1P1-201ENST00000554095 876 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC012186.1-201ENST00000566702 398 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 HMGB1P6-201ENST00000569046 646 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC027796.1-201ENST00000575593 512 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC104695.2-201ENST00000605056 775 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC020634.1-201ENST00000608701 549 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC008115.3-201ENST00000614874 549 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms