Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AP004289.1-201ENST00000436307 2205 ntBASIC5.71□□□□□ -1.49
NPIPA1Q9UND3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AL354854.1-201ENST00000455940 1363 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 HMGN1P20-201ENST00000411849 300 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 PPIAP27-201ENST00000453800 265 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 OR2AF1P-201ENST00000454899 889 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 RN7SL326P-201ENST00000477493 296 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 LSM3P4-201ENST00000502948 309 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC006499.4-201ENST00000510947 694 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC092332.1-201ENST00000563684 829 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 RN7SL753P-201ENST00000581238 290 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC004801.6-201ENST00000616571 978 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC026124.2-201ENST00000621847 656 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 SAMMSON-210ENST00000641260 1308 ntBASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA1Q9UND3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 RN7SKP78-201ENST00000364711 318 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MIR130B-202ENST00000385018 82 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 TRAV35-201ENST00000390462 330 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 SMC4P1-201ENST00000414479 527 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 RPS17P17-201ENST00000419392 409 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 RPS3P2-201ENST00000421346 701 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC066692.1-201ENST00000421721 457 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AL353662.1-201ENST00000439099 327 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC009237.1-201ENST00000442127 744 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 OR13K1P-201ENST00000444577 975 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 HIGD1AP16-201ENST00000450986 258 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 RN7SL165P-201ENST00000477476 291 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 RPL34P33-201ENST00000486062 334 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AL158068.1-201ENST00000506116 616 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 RN7SKP238-201ENST00000516483 249 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 SNORA81.2-201ENST00000516868 170 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 IGLVIV-64-201ENST00000518581 301 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AL583832.1-201ENST00000603227 784 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AC108865.2-201ENST00000606881 432 ntBASIC5.7□□□□□ -1.5
NPIPA1Q9UND3 AL008723.3-201ENST00000608926 449 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms