Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC004232.2-201ENST00000574245 821 ntBASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 AC020916.2-201ENST00000591242 360 ntBASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 RN7SL261P-201ENST00000613441 282 ntBASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 AL357140.4-201ENST00000636827 412 ntBASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
CTNNA3Q9UI47 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AL360271.1-201ENST00000395679 510 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 RNA5SP156-201ENST00000410250 110 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 RPL23AP60-201ENST00000450011 454 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 HMGB1P7-201ENST00000450921 612 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC112187.1-201ENST00000455837 479 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 CYP4F27P-201ENST00000514557 494 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 MIR4701-201ENST00000583094 63 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC141002.1-201ENST00000607025 279 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC073389.3-201ENST00000609434 935 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AL136097.3-201ENST00000611097 505 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 AC139426.3-201ENST00000605648 2059 ntBASIC7.34□□□□□ -1.23
CTNNA3Q9UI47 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CTNNA3Q9UI47 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.34□□□□□ -1.24
CTNNA3Q9UI47 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 RNA5SP279-201ENST00000365513 117 ntBASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 LDHAP2-201ENST00000437325 985 ntBASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 RAB28P2-201ENST00000454299 641 ntBASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC009879.1-201ENST00000520029 839 ntBASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 ZNF969P-201ENST00000510345 2341 ntBASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CTNNA3Q9UI47 AC018717.1-201ENST00000457712 1505 ntBASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTNNA3Q9UI47 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms