Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL161756.3-201ENST00000641216 2071 ntBASIC5.75□□□□□ -1.49
VPS29Q9UBQ0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC005224.3-201ENST00000584683 2140 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RNA5SP110-201ENST00000362638 115 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AL035422.1-201ENST00000414193 397 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AK3P5-201ENST00000432033 519 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RPSAP32-201ENST00000432681 526 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 USP24P1-201ENST00000433802 779 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 FTLP8-201ENST00000446770 267 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RPL29P23-201ENST00000486188 442 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RN7SL362P-201ENST00000494228 267 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC113367.2-201ENST00000505749 160 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC116917.1-201ENST00000520558 305 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC007346.2-201ENST00000564816 892 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 MRPS21P8-201ENST00000569196 235 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC073389.3-201ENST00000609434 935 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC092681.3-201ENST00000609463 678 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 SNX18P12-201ENST00000624821 759 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AL357562.1-201ENST00000624911 609 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 AC130304.1-201ENST00000622942 2385 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 MTCO1P28-201ENST00000574177 1528 ntBASIC5.74□□□□□ -1.49
VPS29Q9UBQ0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 RN7SKP128-201ENST00000364270 303 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC108479.1-201ENST00000431142 427 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 OSTCP1-201ENST00000455507 450 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 SETP4-201ENST00000455717 868 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC104164.1-201ENST00000460282 590 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AL603882.1-201ENST00000463059 681 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 RN7SL612P-201ENST00000497704 295 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 MAST4-IT1-201ENST00000514241 658 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 RNA5SP441-201ENST00000516809 88 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 SUMO2P19-201ENST00000518920 295 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC004232.2-201ENST00000574245 821 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 HTR1DP1-201ENST00000616500 888 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AL512652.1-201ENST00000619006 500 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC073488.6-201ENST00000632293 754 ntBASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS29Q9UBQ0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 AL359955.1-201ENST00000455242 3275 ntBASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
VPS29Q9UBQ0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms