Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PPARGC1AQ9UBK2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 ASNSP6-201ENST00000592770 1618 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 ZNF806-201ENST00000438300 1774 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL445523.1-201ENST00000451184 1362 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 RNA5SP474-201ENST00000391234 90 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 LRRC37BP1-201ENST00000398851 714 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 TAF9BP2-201ENST00000400856 499 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 CYCSP17-201ENST00000407870 315 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 SNORA79B-201ENST00000410557 148 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 DHFRP2-201ENST00000414224 547 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AHCYP8-201ENST00000425108 209 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 RPL23AP28-201ENST00000448062 470 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 RN7SL216P-201ENST00000471607 298 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 RN7SL382P-201ENST00000482631 282 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC008410.1-201ENST00000483777 339 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC008868.1-201ENST00000509786 737 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC093878.1-201ENST00000515630 432 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AP002004.1-206ENST00000532441 876 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL356801.1-201ENST00000559320 294 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL109741.3-201ENST00000561748 592 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 CTSLP2-201ENST00000580501 394 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 SNX6P1-201ENST00000601728 1224 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC146944.4-201ENST00000602697 718 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 MTCO3P22-201ENST00000603219 784 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC099785.1-201ENST00000605697 437 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC025171.4-201ENST00000607250 1047 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AC008115.4-201ENST00000619780 775 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL512506.2-201ENST00000624472 458 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL136531.3-201ENST00000624378 3658 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 AP005139.1-201ENST00000580702 1647 ntBASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
PPARGC1AQ9UBK2 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 AC096992.2-201ENST00000609553 1684 ntBASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 ICE2P1-201ENST00000512800 1849 ntBASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PPARGC1AQ9UBK2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms