Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.78□□□□□ -1
USP35Q9P2H5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 SAMM50P1-201ENST00000455403 1399 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.78□□□□□ -1
USP35Q9P2H5 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC8.78□□□□□ -1
USP35Q9P2H5 OR6K3-202ENST00000368146 996 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC8.78□□□□□ -1
USP35Q9P2H5 SNORA40.4-201ENST00000390971 128 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AC087752.1-201ENST00000391360 558 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AL157702.1-201ENST00000398764 426 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 RN7SKP108-201ENST00000411367 328 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.78□□□□□ -1
USP35Q9P2H5 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 AC097463.1-201ENST00000447288 481 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.78□□□□□ -1
USP35Q9P2H5 PPIAP19-201ENST00000486414 492 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AC063943.2-201ENST00000495697 534 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 RPL19P11-201ENST00000495944 589 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 RNA5SP206-201ENST00000516703 121 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 IGKV3D-25-201ENST00000519599 235 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 EEF1B2P2-201ENST00000519625 676 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 OR4A21P-201ENST00000532759 944 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AC008055.1-201ENST00000547032 609 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AL162632.2-201ENST00000553933 399 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 FXNP1-201ENST00000555153 337 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 ADAD1P2-201ENST00000588476 646 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 AC015922.4-201ENST00000612568 690 ntBASIC8.78□□□□□ -1
USP35Q9P2H5 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.78□□□□□ -1
USP35Q9P2H5 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.78□□□□□ -1
USP35Q9P2H5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
USP35Q9P2H5 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.78□□□□□ -1
USP35Q9P2H5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
USP35Q9P2H5 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
USP35Q9P2H5 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.77□□□□□ -1
USP35Q9P2H5 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.77□□□□□ -1
USP35Q9P2H5 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
USP35Q9P2H5 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
USP35Q9P2H5 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC034229.2-201ENST00000566945 2508 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC023490.2-201ENST00000359859 470 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 UBE2V1P15-201ENST00000407776 448 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 RPL21P50-201ENST00000417698 477 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL034379.1-201ENST00000423216 253 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 RNF19BPX-201ENST00000426224 625 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC022826.1-201ENST00000519383 805 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC008147.3-201ENST00000548666 354 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC067852.5-201ENST00000589299 310 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC012213.4-201ENST00000606457 354 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL592494.3-201ENST00000609485 464 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL133445.2-201ENST00000611191 527 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 U1.41-201ENST00000617626 165 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AL109620.1-201ENST00000618738 1197 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC024884.1-201ENST00000620583 399 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms